Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3005 89.7 1e-12 >seq3005 Length=2003 Score = 89.7 bits (98), Expect = 1e-12 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| Sbjct 156 TGCCTCTCTAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCAAGGGTTCGAG 97 Query 165769 CCCC 165772 |||| Sbjct 96 CCCC 93 Score = 89.7 bits (98), Expect = 1e-12 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| Sbjct 938 TGCCTCTCTAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCAAGGGTTCGAG 879 Query 165769 CCCC 165772 |||| Sbjct 878 CCCC 875 Score = 84.2 bits (92), Expect = 5e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||| ||||||||||||||||||||||||| | ||||| ||||||||| ||||||||| Sbjct 1717 TGCCTCTCTAGCTCAGTCGGTAGAGCGCCAGCCGTTTAAACTGGTGGTCAAGGGTTCGAG 1658 Query 165769 CCCC 165772 |||| Sbjct 1657 CCCC 1654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057751096422770