Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1956 87.8 2e-12 seq4400 86.0 7e-12 seq2533 86.0 7e-12 seq2073 86.0 7e-12 seq2012 86.0 7e-12 >seq1956 Length=7920 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 6924 TCTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACT 6983 Query 60125 ATACTACC 60132 |||||||| Sbjct 6984 ATACTACC 6991 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 6590 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 6649 Query 60126 TACTACC 60132 ||||||| Sbjct 6650 TACTACC 6656 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 7626 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 7685 Query 60126 TACTACC 60132 ||||||| Sbjct 7686 TACTACC 7692 >seq4400 Length=1547 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 391 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 450 Query 60126 TACTACC 60132 ||||||| Sbjct 451 TACTACC 457 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 980 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 1039 Query 60126 TACTACC 60132 ||||||| Sbjct 1040 TACTACC 1046 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 1346 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 1405 Query 60126 TACTACC 60132 ||||||| Sbjct 1406 TACTACC 1412 >seq2533 Length=2026 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 303 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 244 Query 60126 TACTACC 60132 ||||||| Sbjct 243 TACTACC 237 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 879 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 820 Query 60126 TACTACC 60132 ||||||| Sbjct 819 TACTACC 813 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 1455 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 1396 Query 60126 TACTACC 60132 ||||||| Sbjct 1395 TACTACC 1389 Score = 82.4 bits (90), Expect = 9e-11 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 191 CTCCAAGGCCGGGAAT-GAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 133 Query 60126 TACTACC 60132 ||||||| Sbjct 132 TACTACC 126 >seq2073 Length=2359 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 2040 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 2099 Query 60126 TACTACC 60132 ||||||| Sbjct 2100 TACTACC 2106 >seq2012 Length=6104 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 446 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 387 Query 60126 TACTACC 60132 ||||||| Sbjct 386 TACTACC 380 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 1335 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 1276 Query 60126 TACTACC 60132 ||||||| Sbjct 1275 TACTACC 1269 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 1574 CTCCAAGGCTGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 1515 Query 60126 TACTACC 60132 ||||||| Sbjct 1514 TACTACC 1508 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 1909 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 1850 Query 60126 TACTACC 60132 ||||||| Sbjct 1849 TACTACC 1843 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 2387 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 2328 Query 60126 TACTACCGAGGATTG 60140 ||||||| ||| || Sbjct 2327 TACTACCTCGGACTG 2313 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 2499 CTCCATGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 2440 Query 60126 TACTACC 60132 ||||||| Sbjct 2439 TACTACC 2433 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 2865 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 2806 Query 60126 TACTACC 60132 ||||||| Sbjct 2805 TACTACC 2799 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 3904 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 3845 Query 60126 TACTACC 60132 ||||||| Sbjct 3844 TACTACC 3838 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 4732 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 4673 Query 60126 TACTACC 60132 ||||||| Sbjct 4672 TACTACC 4666 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| ||| |||||| |||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 5898 CTCCAAGGCCGGGAATTGAACCCGGGTCTTCCGCGTGACAGGCGGAAATACTAACCACTA 5839 Query 60126 TACTACC 60132 ||||||| Sbjct 5838 TACTACC 5832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571779152414120