Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4975 114 1e-20 seq4905 100 3e-16 seq2624 96.9 3e-15 >seq4975 Length=776 Score = 114 bits (126), Expect = 1e-20 Identities = 286/432 (66%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 23450 TCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGA 23509 ||||||||||| || || || |||| || || | || ||||| ||| || ||| Sbjct 27 TCCGCATGCCATGGTTCAAGATAAATTGCGAAGGATCCTTTCCTCTTGCCGCCTCCTTGA 86 Query 23510 TCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCG 23569 || ||||| || || || || ||||| | ||||| ||||||||||| ||||| ||| Sbjct 87 TCCACGTAGCGTGCAGTTGCATTATACACGCGGAGCATGGGCACGAGACCATTGGA-GCG 145 Query 23570 CC-GCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTAT 23628 || | | ||| | ||| | ||| | | ||| || | || || Sbjct 146 CCCGTTTGTTCCCCTTATGTACGAGTTTGCTGCCCTTATCGAGTGCACTGCTAGCCCGAT 205 Query 23629 GCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGAT 23688 ||||| | | || ||||||| ||||| || ||||| || ||||| |||||||| || Sbjct 206 TCCTCCAGCAGTCTTGGATATCAAAGCGCACTGCTTCAGCGTCTCGTATATGCCCTCTAT 265 Query 23689 GCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGC 23748 || |||||| | | | | ||| || ||||||||||||| | || || ||| Sbjct 266 TGAATCGTCTTTGATGTCCAGAAGGAAGCATGAAGACATTTGCGGTAAAGGTGTGCCGGA 325 Query 23749 CGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTC 23808 ||| |||||||| | ||||| ||||| || | ||||| |||| || || || Sbjct 326 ATTGAAGAGTGTCGGTGTCGCGTGAGTAAAAAATTTCTGGGACATCAGATCATAGGTTTC 385 Query 23809 GATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTG 23868 ||| | || | |||| || |||| || || ||||| ||||||| ||||| ||| Sbjct 386 AATGACACTTTCCACGTCCCCTGCGTGAATCCCACATGCGACCCGCATCAACATGTGTTG 445 Query 23869 AGGTCTCTCGAC 23880 || ||||| || Sbjct 446 CGGCCTCTCCAC 457 >seq4905 Length=757 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 23006 ACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTG 23065 |||||||| | ||| | ||| || |||||||| || || || ||||| || ||| Sbjct 553 ACAAACTTTGGCATGGCAAGCGACGCGAGATTGCAGACAGCAACTTCGTCAGGAGAAGTG 612 Query 23066 TACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTG 23125 ||||| ||||| || ||||| || ||||| |||| || || || | || |||| || Sbjct 613 TACTCAACAATCTCTGTACACAGGTTGCTTGACTTGATAGTTCCGAGGTTCTTCTGATTA 672 Query 23126 CTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTC 23175 |||||| ||||| | ||||||||||| ||| || || || || ||||| Sbjct 673 GATTTTCGGTTGCATGCATCCTTGTAGACCATATAAGGTGTCCCAGTCTC 722 >seq2624 Length=2209 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || || | ||||| || |||||||| | || || || || Sbjct 176 AAGATGCAGATCTTCGTGAAAACATTAACAGGAAAGACGATCACTTTGGAGGTCGAGCCC 117 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| |||| | || ||| || ||| ||||||||||||| | ||||| ||| Sbjct 116 AGCGACACGATCGACAATGTGAAAGCGAAAATTCAGGACAAGGAAGGCATCCCGCCAGAC 57 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||| | || ||||| ||||| ||| |||| || Sbjct 56 CAGCAGCGTTTGATTTTCGCCGGCAAGCAGCTGGAGGA 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445736427781680