Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5038 87.8 3e-12 >seq5038 Length=1412 Score = 87.8 bits (96), Expect = 3e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT-TGCGGCCATCTT 125485 || ||||| ||| ||| || || |||||| |||| ||||||||||| ||| || |||| Sbjct 1399 CTAGTGGCTTTCTGCGCTGTGGAAGGCATCCTCTTCTCGGGTAGTTTCTGC-GCTATCTA 1341 Query 125486 TTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCG 125545 |||| | || |||||||| || ||||||||| |||| ||| ||| | || ||||| Sbjct 1340 TTGGTTAAAAAAGCGCGGCCTGATGCCCGGATTGACTTTTTCTAATGAGATGATTTCTCG 1281 Query 125546 AGACGAGGGCCTACACTGTGACTTTGC 125572 || || || || ||| ||||| || Sbjct 1280 GGATGAAGGGCTGCACGCGGACTTCGC 1254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741009373032040