Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq4070 136 1e-27 seq4799 132 1e-26 >seq4070 Length=869 Score = 136 bits (150), Expect = 1e-27 Identities = 182/253 (72%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 3513 TCCGCCGCGACCTTCACCTTCACGCGCGCGTCGTCTTGCCAATGCCCCTTCACCTCGTGC 3572 || || || ||||| | |||||| |||||| || ||| | || || |||||||| Sbjct 457 TCGGCTGCAACCTTGATCTTCACTTTCGCGTCATCGGTCCAGTAGCCTTTGACCTCGTGA 398 Query 3573 GCCTCGAGCTGGCCGTTCGCGAGCATCACCGTGAAATCGGGCGTGTAGAACGTGTTGTCG 3632 ||||| | ||| | || |||||||||||| | |||||| ||| |||||||||||| Sbjct 397 ATCTCGATCAACCCGCTGGCCAGCATCACCGTGTAGTCGGGCTCGTAAAACGTGTTGTCG 338 Query 3633 GCGAGACGGAACTTGATGCCCTCGAATCGATACCAGACGATTTCGCCGGCCTGCTTCCGC 3692 || || |||||||| | |||||||| || |||| |||| ||| || |||| | Sbjct 337 GCAAGCCGGAACTTCAGTCCCTCGAAGTGAAACCACACGACTTCACCCAGACGCTTGAGA 278 Query 3693 GCCTCCAGATGGTCGGCGTAGCGCTGCTCGGTCTTGTTCATCGCGCCGGCCTTCAGTCGA 3752 | || || || || | |||| |||||||||||| || |||||| ||| || ||| Sbjct 277 CCTTCAAGGTGTTCCCCATAGCTGGCCTCGGTCTTGTTTTTCTCGCCGGTCTTGAGGCGA 218 Query 3753 CCGAGCGCCTGCA 3765 || || ||||||| Sbjct 217 CCAAGTGCCTGCA 205 >seq4799 Length=1140 Score = 132 bits (146), Expect = 1e-26 Identities = 231/327 (71%), Gaps = 12/327 (4%) Strand=Plus/Minus Query 39242 ATCGGCTCCGGATTCAGCAGGCCGCCGCCGACGCGCTTCGTCGTGTAGAACAGTACGTAC 39301 |||| ||| |||| ||| |||||| ||||||||||| ||||| |||||||| || || Sbjct 1139 ATCGCCTCGAAATTCTGCACGCCGCCACCGACGCGCTTGGTCGTATAGAACAGCACATAG 1080 Query 39302 GGCTTCGCCGTGTACGGATCGCGCAGCACGCGAACCCCGATGCGGTCGATGATCAGATA- 39360 ||||| || |||| |||||||||||||| || || || | ||||| | | |||||| Sbjct 1079 GGCTTGGCGCTGTAGGGATCGCGCAGCACCCGTACGCCCACCCGGTCCACCACCAGATAG 1020 Query 39361 -CGTCTGCTGGAAGTCGCCGAAGAGAATCGGCG-TCGAGTTCGCCGCCACATCCGGCATG 39418 || || ||| || || ||| || |||| | | || || | ||| |||||| Sbjct 1019 CCGCGGGC--GAAATCACCAAAGGCGAT-GGCGAAGGCGCCCGAAGCGATATCGGGCATG 963 Query 39419 TCCGGCACCTCGGTAACCGGATAGCCCGCCAGCGTCGCCGGCT-GCCCCGCTACGTACGA 39477 ||| ||| || || ||||||||||| | ||||||| || |||| | ||| | Sbjct 962 TCCTCCACTTCCGTCACCGGATAGCCGAAGATGGTCGCCGCCTCGCCCGCCGCCGTGC-C 904 Query 39478 CGGTTGCCAGAGATAGTTCCCTTGGCCGTCCTTCAGCTTCCGCACCTGACGC--TGCGTG 39535 || ||||| || || || || | ||||||||||||| || | || ||| | || Sbjct 903 GGGCTGCCACAGGTAATTGCCACCGGCGTCCTTCAGCTTGCGGA--TGGCGCTTTCGGTC 846 Query 39536 TTGCGGTTCATCGCGAAGCGGGCGTTG 39562 ||||||||||| | ||||| ||||| Sbjct 845 TTGCGGTTCATTACCCAGCGGCCGTTG 819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143408439111164