Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2624 91.5 1e-13 seq4975 89.7 5e-13 >seq2624 Length=2209 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| | || |||||||||||||| || ||||| ||||| ||| Sbjct 19 TCCTCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCTGGCGGGATGCCTTCCTTG 78 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || |||||| || | | || | || ||| ||| ||||| || | || | Sbjct 79 TCCTGAATTTTCGCTTTCACATTGTCGATCGTGTCGCTGGGCTCGACCTCCAAAGTGATC 138 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || |||| ||||| ||||| |||||||| Sbjct 139 GTCTTTCCTGTTAATGTTTTCACGAAGATCTGCAT 173 >seq4975 Length=776 Score = 89.7 bits (98), Expect = 5e-13 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 146267 AGCGTCTCGTAGATGCCGTCAATGCTATCG-CTTCGAATGCCGAGCAGAAAGCACGAGCA 146325 ||||||||||| ||||| || || |||| ||| | ||| | || || ||||| || | Sbjct 243 AGCGTCTCGTATATGCCCTCTATTGAATCGTCTTTG-ATGTCCAGAAGGAAGCATGAAGA 301 Query 146326 CATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTT 146385 ||| |||| | || || || | ||| | ||||| ||||||| ||||| | ||| Sbjct 302 CATTTGCGGTAAAGGTGTGCCGGAATTGAAGAGTGTCGGTGTCGCGTGAGTAAAAAATTT 361 Query 146386 TCGGCTCATCATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAA 146445 || ||||| ||| ||||| || | || | ||| | | ||||| || | Sbjct 362 CTGGGACATCAGATCATAGGTTTCAATGACACTTTCCACGTCCCCTGCGTGAATCCCACA 421 Query 146446 AGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAA 146505 ||||| ||||| | ||||||||| |||| |||| | | || ||||| | |||||| || Sbjct 422 TGCGACCCGCATCAACATGTGTTGCGGCCTCTCCACTATCTGGTTGTCTAGCTTTAATAA 481 Query 146506 ATA 146508 ||| Sbjct 482 ATA 484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471981063039360