Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3852 86.0 1e-11 seq2112 86.0 1e-11 >seq3852 Length=352 Score = 86.0 bits (94), Expect = 1e-11 Identities = 54/57 (95%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 142055 CTCT-GTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110 |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 243 CTCTAGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGTGGGTTCGA 187 >seq2112 Length=1712 Score = 86.0 bits (94), Expect = 1e-11 Identities = 54/57 (95%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 142055 CTCT-GTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110 |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 234 CTCTAGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGTGGGTTCGA 178 Score = 86.0 bits (94), Expect = 1e-11 Identities = 54/57 (95%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 142055 CTCT-GTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110 |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 409 CTCTAGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGTGGGTTCGA 353 Score = 86.0 bits (94), Expect = 1e-11 Identities = 54/57 (95%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 142055 CTCT-GTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110 |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 757 CTCTAGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGTGGGTTCGA 701 Score = 86.0 bits (94), Expect = 1e-11 Identities = 54/57 (95%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 142055 CTCT-GTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110 |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1224 CTCTAGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGTGGGTTCGA 1168 Score = 86.0 bits (94), Expect = 1e-11 Identities = 54/57 (95%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 142055 CTCT-GTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110 |||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1456 CTCTAGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGTGGGTTCGA 1400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027765963093739