Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_008717.1 Length=36415 Score E Sequences producing significant alignments: (Bits) Value seq1052 102 2e-17 >seq1052 Length=762 Score = 102 bits (112), Expect = 2e-17 Identities = 391/606 (65%), Gaps = 40/606 (7%) Strand=Plus/Plus Query 20371 GCTCTTCGAATCGACCGTGGGCGTAAAACGTACCGACATCGAGGACGACAACCTCGGCGT 20430 || |||||| |||| | ||||| || || | ||||||||||||| | ||| || Sbjct 7 GCCCTTCGAGCTGACCATCGGCGTTCCGCGCACGGCCATCGAGGACGACGAGTACGGGGT 66 Query 20431 CTACGGACCGCTCATGCAGGAAATGGGGCGCGCTGCCGGCGCGCATCCCGACGAGCTGGT 20490 || ||| | | ||| ||||| ||||| | | ||||| |||||| ||||||| Sbjct 67 GTATTCGCCGATGTTCGTGGAGATGGGCCGCGCCGTTGCAGCGCACCCCGACCAGCTGGT 126 Query 20491 CTTCGCCCTGCTCA---AGGCCGGCAACGCCAATCTCTGCTACGACGGTCAAAAC---TT 20544 ||||| |||||| ||| | ||| || || ||||||||| || || || Sbjct 127 GTTCGCGCTGCTCGCGCAGGGCCGCATCGAGAAG---TGCTACGAC---CAGAAGCCGTT 180 Query 20545 CTTCGACACCGATCACCCGGTCTATCCGAACGTGGATGGCACCGGCACGGCGACCACCGT 20604 ||||| |||| | || ||||| | || | || ||||| ||| | | || Sbjct 181 CTTCGCCACCAACCATCCGGTGC---------TCGACGACAACGGCAAGGCCAAGCCAGT 231 Query 20605 TAGCAACCTGTTCGC-GCCGGCCGCTGATCCGGGGGCGGCCTGGTATCTGCTCGACACCA 20663 ||||||| || | | | || |||| || |||||| |||| ||||| | Sbjct 232 GTCCAACCTGGACGATGACAACGGCG----CGGGCCCGAGCTGGTACGTGCTGGACACGA 287 Query 20664 GCCGCAGCCTCAAGCCGTTGATCTACCAGGAGCGCATGAAGCCGTCGTTCACTTCGATGA 20723 ||||| ||| ||||||||||| | |||| | |||| | ||| |||||| | Sbjct 288 GCCGCGCCCTGAAGCCGTTGATTTTCCAGAACCGCAAGCTGCC-----CAACTTCG-TCG 341 Query 20724 CCAAGGA-----AGA-CGACGAGCAGGTCTTCATGGCCGACGAGTACCGCTACGGCGTGC 20777 ||||||| ||| |||||| | || ||| || ||||| | |||||| Sbjct 342 CCAAGGACCGCGAGACCGACGACAACGTGTTCGACCGCGGCGAGTTCAATTACGGCACCG 401 Query 20778 GCTCCCGCTGCAATGTCGGCTTCGGTTTCTGGCAACTGGCAGCGATGTCCACCGAAGAGC 20837 | |||| |||| | |||||||| |||||||| || || | ||||| | | |||| Sbjct 402 ACCGCCGCGGCAACGCGGGCTTCGGCTTCTGGCAGCTCGCGCAGGCGTCCAACAAGGAGC 461 Query 20838 TGAACACGGCGAACTTCGAGAAAGTTTACGACGCCATGCGCAACCAGAAGGCCGACGGCG 20897 | ||| | | ||| | || | | |||||| || | | |||| ||| || Sbjct 462 TCAACGCTGACAACCTGGAAGCCGCCATCACCGCCATCGGCCAGCGCAAGGGCGATCACG 521 Query 20898 GCCGTCCGCT-GGACATTCGCCCGAACCTGCTGGTGGTGCCGACCACTCTGCGCTCCAAG 20956 |||| ||||| || | ||| || | | ||||||||||||| |||| ||| | |||| Sbjct 522 GCCGCCCGCTGGGTCTGTCGGCC-ACCACGCTGGTGGTGCCGCCCACGCTGGAGTTCAAG 580 Query 20957 GCCAAG 20962 |||||| Sbjct 581 GCCAAG 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116398964468446