Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2624 100 5e-16 seq5277 84.2 4e-11 seq4673 84.2 4e-11 seq2030 84.2 4e-11 >seq2624 Length=2209 Score = 100 bits (110), Expect = 5e-16 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | |||||| |||||||| || | | || ||||| || || ||||||||| Sbjct 16 CCATCCTCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCTGGCGGGATGCCTTCC 75 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 ||||| ||||| || || || || ||||| ||||| ||| | || || ||||| || Sbjct 76 TTGTCCTGAATTTTCGCTTTCACATTGTCGATCGTGTC-GCTGGGCTCGACCTCCAAAGT 134 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || ||||| || | || || ||||| |||||||| Sbjct 135 GATCGTCTTTCCTGTTAATGTTTTCACGAAGATCTGCAT 173 >seq5277 Length=736 Score = 84.2 bits (92), Expect = 4e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCC 84518 |||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||| Sbjct 706 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGCGGGTTCGAGCCCC 651 >seq4673 Length=779 Score = 84.2 bits (92), Expect = 4e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCC 84518 |||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||| Sbjct 31 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGCGGGTTCGAGCCCC 86 >seq2030 Length=3458 Score = 84.2 bits (92), Expect = 4e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCC 84518 |||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||| Sbjct 802 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGCGGGTTCGAGCCCC 857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921560432413880