Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_009818.1 Length=36409 Score E Sequences producing significant alignments: (Bits) Value seq1052 93.3 1e-14 >seq1052 Length=762 Score = 93.3 bits (102), Expect = 1e-14 Identities = 389/606 (64%), Gaps = 40/606 (7%) Strand=Plus/Plus Query 19986 GCTCTTCGAATCGACCGTGGGCGTAAAACGTACCGACATCGAGGACGACAACCTCGGCGT 20045 || |||||| |||| | ||||| || || | ||||||||||||| | ||| || Sbjct 7 GCCCTTCGAGCTGACCATCGGCGTTCCGCGCACGGCCATCGAGGACGACGAGTACGGGGT 66 Query 20046 CTACGGACCGCTCATGCAGGAAATGGGGCGTGCTGCCGGCGCGCATCCCGACGAACTGGT 20105 || ||| | | ||| ||||| || || | | ||||| |||||| | ||||| Sbjct 67 GTATTCGCCGATGTTCGTGGAGATGGGCCGCGCCGTTGCAGCGCACCCCGACCAGCTGGT 126 Query 20106 CTTCGCCCTGCTCA---AGGCCGGCAACGCCAATCTCTGCTACGACGGTCAAAAC---TT 20159 ||||| |||||| ||| | ||| || || ||||||||| || || || Sbjct 127 GTTCGCGCTGCTCGCGCAGGGCCGCATCGAGAAG---TGCTACGAC---CAGAAGCCGTT 180 Query 20160 CTTCGACACCGATCACCCGGTCTATCCGAACGTGGATGGCACCGGCACGGCGACCACCGT 20219 ||||| |||| | || ||||| | || | || ||||| ||| | | || Sbjct 181 CTTCGCCACCAACCATCCGGTGC---------TCGACGACAACGGCAAGGCCAAGCCAGT 231 Query 20220 TAGCAACCTGTTCGC-GCCGGCCGCTGATCCGGGGGCGGCCTGGTATCTGCTCGACACCA 20278 ||||||| || | | | || |||| || |||||| |||| ||||| | Sbjct 232 GTCCAACCTGGACGATGACAACGGCG----CGGGCCCGAGCTGGTACGTGCTGGACACGA 287 Query 20279 GCCGCAGCCTCAAGCCGTTGATCTACCAGGAGCGCATGAAGCCGTCGTTCACTTCGTTGA 20338 ||||| ||| ||||||||||| | |||| | |||| | ||| ||||||| | Sbjct 288 GCCGCGCCCTGAAGCCGTTGATTTTCCAGAACCGCAAGCTGCC-----CAACTTCGTCG- 341 Query 20339 CCAAGGA-----AGA-CAACGAGCAGGTCTTCATGGCCGACGAGTACGTCTACGGCGTGC 20392 ||||||| ||| | |||| | || ||| || ||||| | |||||| Sbjct 342 CCAAGGACCGCGAGACCGACGACAACGTGTTCGACCGCGGCGAGTTCAATTACGGCACCG 401 Query 20393 GCTCCCGCTGCAATGTCGGCTTCGGCTTCTGGCAACTGGCGGCGATGTCCACCGAAGAAC 20452 | |||| |||| | ||||||||||||||||| || ||| | ||||| | | || | Sbjct 402 ACCGCCGCGGCAACGCGGGCTTCGGCTTCTGGCAGCTCGCGCAGGCGTCCAACAAGGAGC 461 Query 20453 TGAACCAGGTCAACTTCGAGAAAGTTTACGACGCCATGCGCAACCAGAAGGCCGACGGCG 20512 | ||| | |||| | || | | |||||| || | | |||| ||| || Sbjct 462 TCAACGCTGACAACCTGGAAGCCGCCATCACCGCCATCGGCCAGCGCAAGGGCGATCACG 521 Query 20513 GTCGTCCGCT-GGACATTCGTCCGAACCTGCTGGTGGTGCCGACCACTCTGCGCTCCAAG 20571 | || ||||| || | ||| || | | ||||||||||||| |||| ||| | |||| Sbjct 522 GCCGCCCGCTGGGTCTGTCGGCC-ACCACGCTGGTGGTGCCGCCCACGCTGGAGTTCAAG 580 Query 20572 GCCAAG 20577 |||||| Sbjct 581 GCCAAG 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116379765694858