Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4905 129 7e-25 >seq4905 Length=757 Score = 129 bits (142), Expect = 7e-25 Identities = 248/363 (68%), Gaps = 21/363 (6%) Strand=Plus/Plus Query 116239 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 116298 ||||| ||||||| | ||||||||| || | |||||| || ||||||| ||| ||||| Sbjct 379 ATAAACGCATCCGCCAAACCTTGGACGCCAATGCCAATGGGTCGATGTCGCATGTTAGAG 438 Query 116299 TTTCGAGCGGTCTCCACG---GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 116355 | || || |||| | || || || | || || || | |||||||| || Sbjct 439 TATCTTGC---CTCCGGGATTGGGTAGTGGTTGCGGTCTATGACTTTGTTTAGATTCTTA 495 Query 116356 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA--- 116412 || |||||||| | || ||| || | ||||| | | | ||| | ||| Sbjct 496 CAAACTACCTTTGTCACTTGATGCAGTTGCTCGTAGTTCATA------GTCCCGTCAGGA 549 Query 116413 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 116472 |||||| |||| || | ||| | ||||| ||||| || |||| || || | | Sbjct 550 TTGACAAACTTTGGCATGGCAAGCGACGCGAGATTGCAGACAGCAACTTCGTCAGGAGAA 609 Query 116473 GTGTACTCTATAATTTCCGTACACAAATT---TGAACTCTTAATGGTGCCCAAGTTCTTT 116529 |||||||| | ||| || ||||||| || ||| ||| || || || | |||||| Sbjct 610 GTGTACTCAACAATCTCTGTACACAGGTTGCTTGA---CTTGATAGTTCCGAGGTTCTTC 666 Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589 ||||| || ||| ||| || ||||||||||||| |||||| || ||||| ||||| || Sbjct 667 TGATTAGATTTTCGGTTGCATGCATCCTTGTAGACCATATAAGGTGTCCCAGTCTCTATT 726 Query 116590 TGG 116592 ||| Sbjct 727 TGG 729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613465949309640