Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq700 149 5e-30 >seq700 Length=810 Score = 149 bits (164), Expect = 5e-30 Identities = 336/498 (67%), Gaps = 23/498 (5%) Strand=Plus/Minus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||||||||| | || ||||| ||||||||||| || || ||||| |||| || Sbjct 539 GTGGAAATTATTGCAAGCGACCAAGGAAACAGAACTACACCTTCATATGTAGCTTTTACT 480 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || |||| ||| ||||| ||||| ||||| | |||| | | ||||| || Sbjct 479 GATACAGAACGTTTGGTTGGCGATGCGGCAAAGAACCAAGTTGCGCGCAATCCGGAAAAC 420 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | |||||||| || || || || || ||| || ||||| | ||||||| ||| Sbjct 419 ACCGTATTTGATGCAAAGCGGTTGATCGGCCGAAAGTTCAATGAAGCATCTGTTCAAGCA 360 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAA---TGTTTC-----TGGAAAACCTTAT- 550282 ||||||||||||||||||||| | || || | | | || || ||| || Sbjct 359 GATATGAAGCATTGGCCTTTC---AAGGTCAAGCCGGGTGCAGACATGAAACCCCTCATC 303 Query 550283 --ATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCT 550339 ||||| | | ||||| | ||| | || || || ||| |||| || | Sbjct 302 GAGGTGAAGTTCC-----AAGGAGAGGCGAAA-ACCTTCCACCCGGAAGAAATCTCTGCA 249 Query 550340 ATGGTTTTAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGA 550398 ||||| | || ||||| |||| || | || ||| |||| | | || | || Sbjct 248 ATGGTGCTTGGCAAGATGAAGGAAACTGCAGAAAGC-TTTCTTGGCACAAAGGTGTCTGA 190 Query 550399 TGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGC 550458 ||| || | || || || ||||| || || ||||| || |||||||| |||||||| || Sbjct 189 TGCTGTTGTGACAGTCCCCGCATACTTCAACGACTCGCAGCGTCAAGCAACTAAAGACGC 130 Query 550459 TGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACT 550518 || || || ||||| || || | ||||||||||| |||||||| || || | Sbjct 129 GGGTGTCATCGCGGGACTAAACGTCAAGAGGATTATCAATGAGCCTACTGCAGCGGCTAT 70 Query 550519 TGCATATGGACTTGATAA 550536 ||| ||||| || || || Sbjct 69 TGCTTATGGCCTAGACAA 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029011534220710