Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq700 179 2e-39 >seq700 Length=810 Score = 179 bits (198), Expect = 2e-39 Identities = 361/527 (69%), Gaps = 9/527 (2%) Strand=Plus/Minus Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| ||||| | |||||||| || ||||| ||||| |||||||| |||||||| Sbjct 539 GTGGAAATTATTGCAAGCGACCAAGGAAACAGAACTACACCTTCATATGTAGCTTTTACT 480 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| | | |||| ||||| || || | |||| ||| ||||| | || Sbjct 479 GATACAGAACGTTTGGTTGGCGATGCGGCAAAGAACCAAGTTGCGCGCAATCCGGAAAAC 420 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | |||||||| || | ||||| || || || || |||| | |||| ||| | Sbjct 419 ACCGTATTTGATGCAAAGCGGTTGATCGGCCGAAAGTTCAATGAAGCATCTGTTCAAGCA 360 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTG---GTAAACCATATATAGAA 474625 |||||| ||||||||||| ||||| | | || | ||||| || || Sbjct 359 GATATGAAGCATTGGCCTTTCAAGGTCAAGCCGGGTGCAGACATGAAACCCCTCATCGAG 300 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCA-CCGGAACAAATTTCTTCAATGGTTTT 474684 | | | ||| || | ||| | || || |||||| |||| ||| ||||||| | Sbjct 299 GTGAAGTTCCAAGGAGAGGCGAAA-ACCTTCCACCCGGAAGAAATCTCTGCAATGGTGCT 241 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGG-ACAAGAAGTAACTGATGCAGTA 474742 | ||| ||||| |||| || || | | |||||| |||| | || ||||||| || Sbjct 240 TGGCAAGATGAAGGAAACTGCAGAAAGC-TTTCTTGGCACAA-AGGTGTCTGATGCTGTT 183 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 | || || || ||||| || || || || || ||||||||||||||||| ||||| Sbjct 182 GTGACAGTCCCCGCATACTTCAACGACTCGCAGCGTCAAGCAACTAAAGACGCGGGTGTC 123 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 || || || || || || | ||||| ||||| || || ||||| || |||||||| Sbjct 122 ATCGCGGGACTAAACGTCAAGAGGATTATCAATGAGCCTACTGCAGCGGCTATTGCTTAT 63 Query 474863 GGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA 474909 || || || ||||| | | | | ||| | || || || ||||| || Sbjct 62 GGCCTAGACAAGAAGACCGGCCATGAAATGAAAGTCTTGATCTTCGA 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267948468591092