Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq700 167 3e-36 seq2624 116 5e-21 seq3003 89.7 7e-13 >seq700 Length=810 Score = 167 bits (184), Expect = 3e-36 Identities = 374/547 (68%), Gaps = 16/547 (3%) Strand=Plus/Minus Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || ||||| | | |||||||||||| | || || || || || || || ||||| Sbjct 539 GTGGAAATTATTGCAAGCGACCAAGGAAACAGAACTACACCTTCATATGTAGCTTTTACT 480 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| |||||| | ||||| ||||| ||||| || || || || || || Sbjct 479 GATACAGAACGTTTGGTTGGCGATGCGGCAAAGAACCAAGTTGCGCGCAATCCGGAAAAC 420 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA--GTCCAAG 195536 || || ||||| || ||||| | || || || ||||| || || | || |||| Sbjct 419 ACCGTATTTGATGCAAAGCGGTTGATCGGCCGAAAGTTCAATGA--AGCATCTGTTCAAG 362 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAG---CCTATGA 195593 ||||| ||| | ||| ||| | ||| | |||| ||| | || | | || | | Sbjct 361 CAGATATGAAGCATTGGCCTT-TCAAGGTCAAGCCGG-GTG-CAGACATGAAACCCCTCA 305 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCG-AAGAAATTTCGTCTATG 195652 | | || | || || || ||| |||| | || | |||| ||||||| || | ||| Sbjct 304 TCGAGGTGAAGTTCCAAGGAGAGGCGAAA-ACCTTCCACCCGGAAGAAATCTCTGCAATG 246 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAAT-CTTTCATGGGTAAAACTGTGAAAGATGC 195711 ||| | ||||||||||| ||||| ||| ||||| ||| ||| ||| ||||| Sbjct 245 GTGCTTGGCAAGATGAAGGAAACTGCAGAAAGCTTTCTTGGCACAAAG-GTGTCTGATGC 187 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 |||||||| || || || ||||||| || || || || || || || || ||||| | Sbjct 186 TGTTGTGACAGTCCCCGCATACTTCAACGACTCGCAGCGTCAAGCAACTAAAGACGCGGG 127 Query 195772 TGCTATTGCGGGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 || || ||||| |||||| ||| || ||||||||||| || || || || || |||| Sbjct 126 TGTCATCGCGGGACTAAAC-GTCAAGAGGATTATCAATGAGCCTACTGCAGCGGCTATTG 68 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 ||||||| || |||||||| | | | | || | || || |||||||| || || |||| Sbjct 67 CTTATGGCCTAGACAAGAAGACCGGCCATGAAATGAAAGTCTTGATCTTCGACCTTGGTG 8 Query 195891 GTGGTAC 195897 | || || Sbjct 7 GCGGAAC 1 >seq2624 Length=2209 Score = 116 bits (128), Expect = 5e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| |||||||| | || ||||| || ||||| | ||||| ||| | Sbjct 173 ATGCAGATCTTCGTGAAAACATTAACAGGAAAGACGATCACTTTGGAGGTCGAGCCCAGC 114 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | ||||| || ||||| || ||||||||||| || || || ||| Sbjct 113 GACACGATCGACAATGTGAAAGCGAAAATTCAGGACAAGGAAGGCATCCCGCCAGACCAG 54 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTAC 172025 || || | ||||| || || || ||||| || ||||||||||| Sbjct 53 CAGCGTTTGATTTTCGCCGGCAAGCAGCTGGAGGATGGACGTAC 10 >seq3003 Length=937 Score = 89.7 bits (98), Expect = 7e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 || || ||||| ||||| || ||||| || || || | | | | | |||| || Sbjct 711 ATCGGCATCGACTTAGGCACAACTTATTCTTGCGTAGCTATTTACAAGAATGGCGCGGTG 770 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || || || || || |||||||||||| | | || || || || ||||| ||||| ||| Sbjct 771 GACATCATTCCCAACGACCAAGGAAACAGAATCACGCCTTCTTATGTTGCGTTTACTGAT 830 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 |||| ||||| || || || || || || |||||| | | || ||||||| | || Sbjct 831 GATGAGCGTCTGGTGGGCGAAGCTGCCAAGAATCAGGCTACAATCAACCCTACGCAAACG 890 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCG 195510 | || || | || ||||||||||| || Sbjct 891 TTATTCGATGTCAAACGTCTTATTGGCCG 919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657818166976880