Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4975 136 5e-26 seq1204 111 2e-18 >seq4975 Length=776 Score = 136 bits (150), Expect = 5e-26 Identities = 188/263 (71%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || || |||||||| || || | ||| | |||||||||||||||||||| || ||||| Sbjct 84 TGATCCACGTAGCGTGCAGTTGCATTATACACGCGGAGCATGGGCACGAGACCATTGGAG 143 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||||| || ||| | ||| | | || || | | | |||| | || | ||| Sbjct 144 CGCCCGTTTGTTCCCCTTATGTACGAGTTTGCTGCCCTTATCGAGTGCACTGCTAGCCCG 203 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || || || | |||||| || | |||||||| || ||||| ||||| |||||||| Sbjct 204 ATTCCTCCAGCAGTCTTGGATATCAAAGCGCACTGCTTCAGCGTCTCGTATATGCCCTCT 263 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || || ||| | || ||||||| || ||||| || || ||||||| | |||||| Sbjct 264 ATTGAATCGTCTTTGATGTCCAGAAGGAAGCATGAAGACATTTGCGGTAAAGGTGTGCCG 323 Query 1630306 GCGTTGAAGAGCGTGGGCGTCGC 1630328 | |||||||| || || ||||| Sbjct 324 GAATTGAAGAGTGTCGGTGTCGC 346 >seq1204 Length=874 Score = 111 bits (122), Expect = 2e-18 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1254345 CTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATC 1254404 ||||| || || ||| ||| ||| || || || | ||||| ||| |||| | || Sbjct 359 CTGGCGAGCTCTCCGGGCAGGATGAGCTTGACCGCCGACTGGACCTCCCGCGAGGAGAGG 300 Query 1254405 GTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATG 1254464 || | | |||||| || | |||| | | |||||||| ||| ||||||| || Sbjct 299 GTCCTCCTCTTGTTGAAGCGGACCAGCTTGGAGCCCTCGGTGGCGACCCGGTCGAAGGTG 240 Query 1254465 TCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGC 1254524 |||| || || |||||||||| ||| | ||| || |||||||| | |||||||||| Sbjct 239 TCGTGGATGAAGGAGTTCATGATGTTCATGGCCTTCTTCGAGATGCCGATGTCGGGGTGC 180 Query 1254525 ACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||| || |||||||||||| Sbjct 179 ACCTGCTTCAGGACCTTGTAGATG 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106697774070143