Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1204 159 5e-33 seq4975 132 8e-25 >seq1204 Length=874 Score = 159 bits (176), Expect = 5e-33 Identities = 180/241 (75%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| ||||||||||| ||||| || || ||| ||| Sbjct 400 TGTACTTGGTGACGGCCTTGGTTCCCTCCGAGACGGCGTGTCTGGCGAGCTCTCCGGGCA 341 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || || | ||||| ||| || | | || || | | |||||| || Sbjct 340 GGATGAGCTTGACCGCCGACTGGACCTCCCGCGAGGAGAGGGTCCTCCTCTTGTTGAAGC 281 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| | | |||||||| ||| ||||||| |||||| || || ||||||| Sbjct 280 GGACCAGCTTGGAGCCCTCGGTGGCGACCCGGTCGAAGGTGTCGTGGATGAAGGAGTTCA 221 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || || |||||||| | |||||||||||||||||| || ||||||| Sbjct 220 TGATGTTCATGGCCTTCTTCGAGATGCCGATGTCGGGGTGCACCTGCTTCAGGACCTTGT 161 Query 1485710 A 1485710 | Sbjct 160 A 160 >seq4975 Length=776 Score = 132 bits (146), Expect = 8e-25 Identities = 187/263 (71%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || || || ||||| || || | ||| | ||||||||||||||||| || || ||||| Sbjct 84 TGATCCACGTAGCGTGCAGTTGCATTATACACGCGGAGCATGGGCACGAGACCATTGGAG 143 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||| || ||| | ||| | | | || | | | |||| | || | ||| Sbjct 144 CGCCCGTTTGTTCCCCTTATGTACGAGTTTGCTGCCCTTATCGAGTGCACTGCTAGCCCG 203 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || || || | |||||| || | ||||||| |||||||||||||| |||||||| Sbjct 204 ATTCCTCCAGCAGTCTTGGATATCAAAGCGCACTGCTTCAGCGTCTCGTATATGCCCTCT 263 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || || ||| | || ||||||| || ||||| || || ||||||| | |||||| Sbjct 264 ATTGAATCGTCTTTGATGTCCAGAAGGAAGCATGAAGACATTTGCGGTAAAGGTGTGCCG 323 Query 2073781 GCATTGAAGAGCGTGGGCGTCGC 2073803 | ||||||||| || || ||||| Sbjct 324 GAATTGAAGAGTGTCGGTGTCGC 346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915674211236381