Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq700 143 2e-28 >seq700 Length=810 Score = 143 bits (158), Expect = 2e-28 Identities = 361/542 (67%), Gaps = 9/542 (2%) Strand=Plus/Plus Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 282343 ||||| ||||| | || || || | || |||||||| | | | || || || || Sbjct 1 GTTCCGCCACCAAGGTCGAAGATCAAGACTTTCATTTCATGGCCGGTCTTCTTGTCTAGG 60 Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| |||| ||| || ||||| || ||||| ||||| ||| || || || || || Sbjct 61 CCATAAGCAATAGCCGCTGCAGTAGGCTCATTGATAATCCTCTTGACGTTTAGTCCCGCG 120 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || || |||||||| ||||| | || || ||||| || ||||| || || || Sbjct 121 ATGACACCCGCGTCTTTAGTTGCTTGACGCTGCGAGTCGTTGAAGTATGCGGGGACTGTC 180 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCT-TGCTGTTTGTTTCATTTTACT 282522 | ||| ||||| | || | | | |||| | |||| | ||| |||| ||||| || | Sbjct 181 ACAACAGCATCAGACACCTTTGTGCCAAGA-AAGCTTTCTGCAGTTTCCTTCATCTTGCC 239 Query 282523 TAAAATCATTGATGAAATTTGTTCTGGA--GAATATTGCTTGGATTCATTTTGATATGAT 282580 | | ||||| || |||| ||| || ||| || || | || ||| | Sbjct 240 AAGCACCATTGCAGAGATTTCTTCCGGGTGGAAGGTT--TTCGCCTCTCCTTGGAACTTC 297 Query 282581 ACTTCAAAATATGGTTT-ATTAC--CAACATTAATAACTTTAAATGGCCAATATTTCATA 282637 || || | ||||| || | || | | || || || ||||||| |||||| Sbjct 298 ACCTCGATGAGGGGTTTCATGTCTGCACCCGGCTTGACCTTGAAAGGCCAATGCTTCATA 357 Query 282638 TCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATA 282697 |||| ||||||| | ||||| || | || || || || || ||||||||||| | Sbjct 358 TCTGCTTGAACAGATGCTTCATTGAACTTTCGGCCGATCAACCGCTTTGCATCAAATACG 417 Query 282698 GTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC 282757 || || ||||| ||| |||| | || || ||||| |||| || | ||||||| Sbjct 418 GTGTTTTCCGGATTGCGCGCAACTTGGTTCTTTGCCGCATCGCCAACCAAACGTTCTGTA 477 Query 282758 TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCA 282817 || ||||| | |||||||| || || || | || ||||| || | ||||||||||| Sbjct 478 TCAGTAAAAGCTACATATGAAGGTGTAGTTCTGTTTCCTTGGTCGCTTGCAATAATTTCC 537 Query 282818 AC 282819 || Sbjct 538 AC 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740366313831654