Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4975 138 2e-26 seq1204 122 1e-21 >seq4975 Length=776 Score = 138 bits (152), Expect = 2e-26 Identities = 205/288 (71%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||| | || || || ||| ||||| || || ||||| ||| ||||||| || Sbjct 370 ATGTCCCAGAAATTTTTTAC-TCACGCGACACCGACACTCTTCAATTCCGGCACACCTTT 312 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 ||||| | || || ||||| || ||||||| || | |||||| || |||||||| || Sbjct 311 ACCGCAAATGTCTTCATGCTTCCTTCTGGACATCAAAGACGATTCAATAGAGGGCATATA 252 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 || ||||| ||||||||||| | || |||||| | || || || ||||| | || | Sbjct 251 CGAGACGCTGAAGCAGTGCGCTTTGATATCCAAGACTGCTGGAGGAATCGGGCTAGCAGT 192 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | | | || || | | ||| | ||| || ||||| | ||||| || || Sbjct 191 GCACTCGATAAGGGCAGCAAACTCGTACATAAGGGGAACAAACGGGCGCTCCAATGGTCT 132 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 ||||||||||| ||||| | ||| | || || |||||||| || || Sbjct 131 CGTGCCCATGCTCCGCGTGTATAATGCAACTGCACGCTACGTGGATCA 84 >seq1204 Length=874 Score = 122 bits (134), Expect = 1e-21 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||| || ||||||||||||||| || | | || |||| || || ||| || Sbjct 157 ATCTACAAGGTCCTGAAGCAGGTGCACCCC-GA--CATCGG--CATC-TCGAAGAAGGCC 210 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||||| || || |||||| ||||||| ||| |||||||| | Sbjct 211 ATGAACATCATGAACTCCTTCATCCACGACACCTTCGACCGGGTCGCCACCGAGGGCTCC 270 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||| |||| ||||||| | | || || | |||| ||| ||||| | || || Sbjct 271 AAGCTGGTCCGCTTCAACAAGAGGAGGACCCTCTCCTCGCGGGAGGTCCAGTCGGCGGTC 330 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| ||| ||| || || ||||| ||||||||||| ||||| |||| Sbjct 331 AAGCTCATCCTGCCCGGAGAGCTCGCCAGACACGCCGTCTCGGAGGGAACCA 382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177292385563398