Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4975 140 4e-28 seq4905 120 4e-22 >seq4975 Length=776 Score = 140 bits (154), Expect = 4e-28 Identities = 297/437 (68%), Gaps = 11/437 (3%) Strand=Plus/Plus Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 111706 || || ||||| | ||||||||| |||||||| |||||||| | ||||| ||||| || Sbjct 9 TCGAGAAACTCGAGGATATCCGCATGCCATGGTTCAAGATAAATTGCGAAGGATCCTTTC 68 Query 111707 C----GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762 | | |||| |||||| || ||||| || || || ||| | ||||| ||||| || Sbjct 69 CTCTTGCCGCCTC-CTTGATCCACGTAGCGTGCAGTTGCATTATACACGCGGAGCATGGG 127 Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACA 111820 | | ||||| || | || ||||| |||| || ||||| || | || || | Sbjct 128 CACGAGACCATTGGAGCGCCCGTTTGTTCCCCTTATGTACGAGTTTGCT--GCCCTTATC 185 Query 111821 TCATGGATGTGC-ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 || | ||| | ||| || || ||||| ||| || || || |||| | | || Sbjct 186 GAGTGCAC-TGCTAGCCCGATTCCTCCAGCAGTCTTGGATATCAAAGCGCACTGCTTCAG 244 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 || | || || || | ||||| || || ||| || | | ||||||||| ||||| Sbjct 245 CGTCTCGTATATGCCCTCTATTGAATCGTCTTTGATGTCCAGAAGGAAGCATGAAGACAT 304 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 111999 |||||| ||||| || | ||||||||| || ||||| |||||| | || | || Sbjct 305 TTGCGGTAAAGGTGTGCCGGAATTGAAGAGTGTCGGTGTCGCGTGAGTAAAAAATTTCTG 364 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 ||||||| || || || || | |||| || | ||| | |||| || || ||| Sbjct 365 GGACATCAGATCATAGGTTTCAATGACACTTTCCACGTCCCCTGCGTGAATCCCACATGC 424 Query 112060 GACCCGCATGAACATGT 112076 ||||||||| ||||||| Sbjct 425 GACCCGCATCAACATGT 441 >seq4905 Length=757 Score = 120 bits (132), Expect = 4e-22 Identities = 235/347 (68%), Gaps = 3/347 (1%) Strand=Plus/Plus Query 111044 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC 111103 ||||| ||||||| | |||||| || || | ||||| |||| |||||||| ||||| Sbjct 379 ATAAACGCATCCGCCAAACCTTGGACGCCAATGCCAATGGGTCGATGTCGCATGTTAGAG 438 Query 111104 TTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTA 111163 | || || | | || || || | ||| |||||| ||||||||| || | Sbjct 439 TATCTTGCCTCCGGGATTGGGTAGTGGTTGCGGTCTATGACTTTGTTTAGATTCTTACAA 498 Query 111164 ACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACA 111223 || | |||||| | || ||| |||| || || | | ||| | || ||||||| Sbjct 499 ACTACCTTTGTCACTTGATGCAGTTGCTCGTAGTTCATAGTCCCG---TCAGGATTGACA 555 Query 111224 TACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTAC 111283 ||||||| | ||| | || || | |||||| ||||| || || | |||||| Sbjct 556 AACTTTGGCATGGCAAGCGACGCGAGATTGCAGACAGCAACTTCGTCAGGAGAAGTGTAC 615 Query 111284 TCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTC 111343 || | ||| |||||||| | |||| ||| || || || | ||||| || ||| Sbjct 616 TCAACAATCTCTGTACACAGGTTGCTTGACTTGATAGTTCCGAGGTTCTTCTGATTAGAT 675 Query 111344 TTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 111390 || |||||| ||||||||||||| ||| || || ||||| ||||| Sbjct 676 TTTCGGTTGCATGCATCCTTGTAGACCATATAAGGTGTCCCAGTCTC 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627989772698400