Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq700 158 4e-33 seq2624 109 2e-18 seq3003 93.3 1e-13 seq4797 91.5 4e-13 seq3609 91.5 4e-13 seq2367 91.5 4e-13 >seq700 Length=810 Score = 158 bits (174), Expect = 4e-33 Identities = 366/543 (67%), Gaps = 8/543 (1%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| ||||||| || ||||| |||||||| || || ||||| || || ||||| Sbjct 539 GTGGAAATTATTGCAAGCGACCAAGGAAACAGAACTACACCTTCATATGTAGCTTTTACT 480 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || || ||| || |||| ||| | ||||| || |||| ||| ||||| |||| Sbjct 479 GATACAGAACGTTTGGTTGGCGATGCGGCAAAGAACCAAGTTGCGCGCAATCCGGAAAAC 420 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || |||||||| ||||| | || || ||| || ||| |||| ||| | Sbjct 419 ACCGTATTTGATGCAAAGCGGTTGATCGGCCGAAAGTTCAATGAAGCATCTGTTCAAGCA 360 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGAT-AAACCAATTATTGA 349497 ||| | || |||| ||||| | || || | | | || ||||| | || || Sbjct 359 GATATGAAGCATTGGCCTTTCAAGGTCAAGCCGGGTG-CAGACATGAAACCCCTCATCGA 301 Query 349498 GGTTGAATATAAAGGTGAA-CAAAAACAATTTTTACCCG-AAGAAATTTCATCAATGGTT 349555 ||| | | |||| || | ||||| || ||||| ||||||| || ||||||| Sbjct 300 GGTGAAGTTCCAAGGAGAGGCGAAAACC--TTCCACCCGGAAGAAATCTCTGCAATGGTG 243 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | | || |||||||||| ||| ||| | | | || || || ||||||||||| Sbjct 242 CTTGGCAAGATGAAGGAAACTGCAGAAAGCTTTCTTGGCACAAAGGTGTCTGATGCTGTT 183 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 | || || || || || || || || | |||||| ||||| ||||| || || | Sbjct 182 GTGACAGTCCCCGCATACTTCAACGACTCGCAGCGTCAAGCAACTAAAGACGCGGGTGTC 123 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || ||||| |||| || || || || ||||| || ||||| || || ||||| ||| Sbjct 122 ATCGCGGGACTAAACGTCAAGAGGATTATCAATGAGCCTACTGCAGCGGCTATTGCTTAT 63 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT-ATTTTTGATTTAGGTGGTGG 349794 || || || || | || | ||| |||| || | |||| || || || | ||||| || Sbjct 62 GGCCTAGACAAGAAGACCGGCCATGAAATGAA-AGTCTTGATCTTCGACCTTGGTGGCGG 4 Query 349795 TAC 349797 || Sbjct 3 AAC 1 >seq2624 Length=2209 Score = 109 bits (120), Expect = 2e-18 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 || |||||||| || ||||| || || || || || || || || | ||| ||||| || Sbjct 1 TCCGATAATGTACGTCCATCCTCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCT 60 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || || || ||||| || ||||||||||| ||||| ||||| || |||| || || Sbjct 61 GGCGGGATGCCTTCCTTGTCCTGAATTTTCGCTTTCACATTGTCGATCGTGTCGCTGGGC 120 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | |||||||| |||| |||||| || || |||||||| Sbjct 121 TCGACCTCCAAAGTGATCGTCTTTCCTGTTAATGTTTTCACGAAGATCTGCAT 173 >seq3003 Length=937 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 || || ||||| ||||| || ||||||||||| || ||| ||| | |||| || Sbjct 711 ATCGGCATCGACTTAGGCACAACTTATTCTTGCGTAGCTATTTACAAGAATGGCGCGGTG 770 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || ||| | || || ||||| ||||||| ||||| || || ||||| ||||| || Sbjct 771 GACATCATTCCCAACGACCAAGGAAACAGAATCACGCCTTCTTATGTTGCGTTTACTGAT 830 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 ||||||| || | || || |||| || ||||| ||| | || || | | ||| Sbjct 831 GATGAGCGTCTGGTGGGCGAAGCTGCCAAGAATCAGGCTACAATCAACCCTACGCAAACG 890 Query 349382 GTTTTTGATGCTAAGCGACTTATTGG 349407 | || |||| || || |||||||| Sbjct 891 TTATTCGATGTCAAACGTCTTATTGG 916 >seq4797 Length=1228 Score = 91.5 bits (100), Expect = 4e-13 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 423771 GATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAA-GCCTCGTGGGT 423828 |||| ||||||||||||||| | ||||||||||||||| ||| |||| || ||||||| Sbjct 396 GATGGCCGAGTGGTCTAAGGCGTCAGACTTAAGATCTGATGGAAGAAATTCCGCGTGGGT 337 Query 423829 TCAAACCCCACTCCGTGCATTT 423850 ||||||||||||| ||||| || Sbjct 336 TCAAACCCCACTCTGTGCAGTT 315 Score = 91.5 bits (100), Expect = 4e-13 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 423771 GATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAA-GCCTCGTGGGT 423828 |||| ||||||||||||||| | ||||||||||||||| ||| |||| || ||||||| Sbjct 1098 GATGGCCGAGTGGTCTAAGGCGTCAGACTTAAGATCTGATGGAAGAAATTCCGCGTGGGT 1039 Query 423829 TCAAACCCCACTCCGTGCATTT 423850 ||||||||||||| ||||| || Sbjct 1038 TCAAACCCCACTCTGTGCAGTT 1017 Score = 86.0 bits (94), Expect = 2e-11 Identities = 71/83 (86%), Gaps = 3/83 (4%) Strand=Plus/Minus Query 423771 GATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAA-GCCTCGTGGGT 423828 |||| ||||||||||||||| | ||||||||||||||| ||| |||| || ||||||| Sbjct 766 GATGGCCGAGTGGTCTAAGGCGTCAGACTTAAGATCTGATGGAAGAAATTCCGCGTGGGT 707 Query 423829 TCAAA-CCCCACTCCGTGCATTT 423850 ||||| |||||||| ||||| || Sbjct 706 TCAAACCCCCACTCTGTGCAGTT 684 >seq3609 Length=2215 Score = 91.5 bits (100), Expect = 4e-13 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 423771 GATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAA-GCCTCGTGGGT 423828 |||| ||||||||||||||| | ||||||||||||||| ||| |||| || ||||||| Sbjct 1084 GATGGCCGAGTGGTCTAAGGCGTCAGACTTAAGATCTGATGGAAGAAATTCCGCGTGGGT 1143 Query 423829 TCAAACCCCACTCCGTGCATTT 423850 ||||||||||||| ||||| || Sbjct 1144 TCAAACCCCACTCTGTGCAGTT 1165 Score = 84.2 bits (92), Expect = 7e-11 Identities = 73/88 (83%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 423765 AGCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAA-GCCTC 423822 |||| |||| ||||||||||||||| | |||||| ||| |||| ||| |||| || | Sbjct 726 AGCACAGATGGCCGAGTGGTCTAAGGCGTCAGACTCAAGTTCTGATGGAAGAAATTCCGC 785 Query 423823 GTGGGTTCAAACCCCACTCCGTGCATTT 423850 ||||||||||||||||||| ||||| || Sbjct 786 GTGGGTTCAAACCCCACTCTGTGCAGTT 813 >seq2367 Length=3195 Score = 91.5 bits (100), Expect = 4e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 423971 TAGCTCAGTTGGTTAGAGCGTGCGGCTGTTAACCGCAATGTCACTGGTTCGATCCCAGTA 424030 |||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||| Sbjct 2712 TAGCTCAGTTGGTTAGAGCGTGTGGCTGTTAACCACAAAGTCGCTGGTTCGATCCCAGCC 2771 Query 424031 CGGAGCGCTA 424040 ||| ||||| Sbjct 2772 AGGACCGCTA 2781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515149971034337