Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4975 141 1e-28 seq4905 86.0 7e-12 >seq4975 Length=776 Score = 141 bits (156), Expect = 1e-28 Identities = 306/451 (68%), Gaps = 10/451 (2%) Strand=Plus/Plus Query 79462 TCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTG 79521 |||||||| || | ||| || || ||||| || || ||||| || ||||| || || || Sbjct 9 TCGAGAAACTCGAGGATATCCGCATGCCATGGTTCAAGATAAATTGCGAAGGATCCTTTC 68 Query 79522 CGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGC 79581 | ||||||||| || || | ||||| || || || || | || |||||||||||| Sbjct 69 CTCTTGCCGCCTCCTTGATCCACGTAGCGTGCAGTTGCATTATACACGCGGAGCATGGGC 128 Query 79582 ACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATT--CGTGTACCGCTCGCCCGAATGT 79639 |||| || | || | ||||| || || | || || || ||| |||| || Sbjct 129 ACGAGACCATTGGAGCGCCCGTTTGTTCCCCTTATGTACGAGTTT-GCT-GCCCTTAT-- 184 Query 79640 TCGAG--CAGTGG-ATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGA 79696 |||| || || | ||||| || || | |||||| || ||||||| ||| | Sbjct 185 -CGAGTGCACTGCTAGCCCGATTCCTCCAGCAGTCTTGGATATCAAAGCGCACTGCTTCA 243 Query 79697 GCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACA 79756 |||||||||| |||||||| || || ||||| || || | | |||||||| |||| Sbjct 244 GCGTCTCGTATATGCCCTCTATTGAATCGTCTTTGATGTCCAGAAGGAAGCATGAAGACA 303 Query 79757 TCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTT 79816 | || || || |||| |||||||| ||||| |||||||| || || || || | Sbjct 304 TTTGCGGTAAAGGTGTGCCGGAATTGAAGAGTGTCGGTGTCGCGTGAGTAAAAAATTTCT 363 Query 79817 GGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCG 79876 || ||||||||| || || || |||| | | ||| | |||| || || | Sbjct 364 GGGACATCAGATCATAGGTTTCAATGACACTTTCCACGTCCCCTGCGTGAATCCCACATG 423 Query 79877 CGACGCGCATGAAGAGGTACTGGGGCGTCTC 79907 |||| ||||| || | || || ||| |||| Sbjct 424 CGACCCGCATCAACATGTGTTGCGGCCTCTC 454 Score = 109 bits (120), Expect = 6e-19 Identities = 255/381 (67%), Gaps = 8/381 (2%) Strand=Plus/Minus Query 19166 GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAAC 19225 || || || || |||||| |||||| || || || |||||||| ||||| || ||||| Sbjct 385 GAAACCTATGATCTGATGTCCCAGAAATTTTTTACTCACGCGACACCGACACTCTTCAAT 326 Query 19226 GCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGC 19285 |||| || ||||| ||||| || ||||| ||| || || || || Sbjct 325 TCCGGCACACCTTTACCGCAAATGTCTTCATGCTTCCTTCTGGACATCAAAGACGATTCA 266 Query 19286 ATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGT 19345 || |||||||| ||||||||||| ||| ||||||| || |||||| | || || Sbjct 265 ATAGAGGGCATATACGAGACGCTGAAGCAGTGCGCTTTGATATCCAAGACTGCTGGAGGA 206 Query 19346 ATCGGGAT-CCACTG--CTCGA-ATATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 |||||| | || || ||||| | | | | | |||| || | || || || Sbjct 205 ATCGGGCTAGCAGTGCACTCGATAAGGGCAGCAAACTCGTAC----ATAAGGGGAACAAA 150 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 ||| || | ||| |||| || ||||||||||| | || || || | ||||| Sbjct 149 CGGGCGCTCCAATGGTCTCGTGCCCATGCTCCGCGTGTATAATGCAACTGCACGCTACGT 90 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | || || |||||||| | || || || ||||| || || || || |||||||| || Sbjct 89 GGATCAAGGAGGCGGCAAGAGGAAAGGATCCTTCGCAATTTATCTTGAACCATGGCATGC 30 Query 19522 GGACGTCATGGATTTCCTCGA 19542 ||| || | || || ||||| Sbjct 29 GGATATCCTCGAGTTTCTCGA 9 >seq4905 Length=757 Score = 86.0 bits (94), Expect = 7e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 19782 TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACG 19841 |||| ||||||| | ||||| || ||||| || ||| ||||||||| || ||| Sbjct 739 TCCTGCAAAGCCAAATAGAGACTGGGACACCTTATATGGTCTACAAGGATGCATGCAACC 680 Query 19842 CCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCA 19901 || || |||||||||||| |||| | |||||||| |||||||||||| || || Sbjct 679 GAAAATCTAATCAGAAGAACCTCGGAACTATCAAGTCAAGCAACCTGTGTACAGAGATTG 620 Query 19902 TGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCC-TGCCG 19960 | ||| | || ||||| ||| || || ||||| ||||| || |||| |||| Sbjct 619 TTGAGTACACTTCTCCTGACGAAGTTGCTGTCTGCAATCTCGCGTCGCT-TGCCATGCCA 561 Query 19961 ACTTTCGTCAA 19971 | || ||||| Sbjct 560 AAGTTTGTCAA 550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548487918563760