Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascogregarina_20taiwanensis_20[genbank_20GCA_5F000172235.1_202010- 01-28] 5,379 sequences; 6,149,411 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4975 118 1e-21 seq2624 116 4e-21 seq5038 87.8 2e-12 >seq4975 Length=776 Score = 118 bits (130), Expect = 1e-21 Identities = 301/455 (66%), Gaps = 21/455 (5%) Strand=Plus/Plus Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTG 81372 |||||||| || | ||| |||||||||||||| || ||||| | |||| || || || Sbjct 9 TCGAGAAACTCGAGGATATCCGCATGCCATGGTTCAAGATAAATTGCGAAGGATCCTTTC 68 Query 81373 CGA---CGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGG 81429 | | ||| || || | ||||| || ||||| || ||| | || || | ||| || Sbjct 69 CTCTTGCCGCCTCCTTGATCCACGTAGCGTGCAGTTGCATTATACACGCGGAGCATGGGC 128 Query 81430 ATGATACCATCTGACTGACCGTTCGTACCC-------ACGA-TACGCGACCCCT-TGGCG 81480 | || ||||| || | ||||| || ||| |||| | || ||| | | | | Sbjct 129 ACGAGACCATTGGAGCGCCCGTTTGTTCCCCTTATGTACGAGTTTGCTGCCCTTATCGAG 188 Query 81481 CGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGG 81540 |||| |||| || ||||| || || | ||| || ||| ||| ||| | Sbjct 189 TGCAC--TGCT-------AGCCCGATTCCTCCAGCAGTCTTGGATATCAAAGCGCACTGC 239 Query 81541 TTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTT 81600 |||| ||||| || || ||||| || ||| | ||| ||||| || | ||| || Sbjct 240 TTCAGCGTCTCGTATATGCCCTCTATTGAATCGTCTTTGATGTCCAGAAGGAAGCATGAA 299 Query 81601 GACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAA 81660 ||||| || || || ||||| |||||| ||||| || ||||||||| | ||| | Sbjct 300 GACATTTGCGGTAAAGGTGTGCCGGAATTGAAGAGTGTCGGTGTCGCGTGAGTAAAAAAT 359 Query 81661 CGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCG 81720 | |||||||| ||||||||||| |||| | | | || | ||||||| || Sbjct 360 TTCTGGGACATCAGATCATAGGTTTCAATGACACTTTCCACGTCCCCTGCGTGAATCCCA 419 Query 81721 ATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 || || ||||| ||||||| || ||| |||| Sbjct 420 CATGCGACCCGCATCAACATGTGTTGCGGCCTCTC 454 >seq2624 Length=2209 Score = 116 bits (128), Expect = 4e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || || ||||| || ||| | ||||| ||| | | Sbjct 173 ATGCAGATCTTCGTGAAAACATTAACAGGAAAGACGATCACTTTGGAGGTCGAGCCCAGC 114 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| |||| || ||||||||||||||||| || || || ||||||||| Sbjct 113 GACACGATCGACAATGTGAAAGCGAAAATTCAGGACAAGGAAGGCATCCCGCCAGACCAG 54 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC 27569 |||||| | ||||| || || ||||| || ||||||| ||||| Sbjct 53 CAGCGTTTGATTTTCGCCGGCAAGCAGCTGGAGGATGGACGTAC 10 >seq5038 Length=1412 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 64737 TGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGG 64796 ||||||||| || |||| || || ||||| |||| | ||| |||||||||| || Sbjct 1382 TGTGGAAGGCATCCTCTTCTCGGGTAGTTTCTGCGCTATCTATTGGTTAAAAAAGCGCGG 1323 Query 64797 CCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCAC 64854 ||||||||| || || | ||||| || ||| |||| |||||||| || ||||| ||| Sbjct 1322 CCTGATGCCCGGATTGACTTTTTCTAATGAGATGATTTCTCGGGATGAAGGGCTGCAC 1265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570272053754480