Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5 100 3e-16 >seq5 Length=493739 Score = 100 bits (110), Expect = 3e-16 Identities = 376/584 (64%), Gaps = 12/584 (2%) Strand=Plus/Plus Query 94060 GCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTC 94119 ||||| || ||||||| ||||| || || || | |||||| | || || ||| | Sbjct 438477 GCCAGCGGCGCCTACATTCGCGGCACAAACGGTAAGAGCAACGGTATTGTGCCCATGTTG 438536 Query 94120 CGGGTCTTCAA--CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTT 94177 || | || || |||| ||||||||||| ||||| ||||| || | | | ||||| | Sbjct 438537 CGTATTTTTAATGCAACC--GCGCGCTACGTAGACCAAGGTGGCGGTAAGCGCAAGGGCT 438594 Query 94178 CTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAA 94237 |||| || | || || ||||| |||||||| || | || || | || |||| | Sbjct 438595 CTTTTGCCATTTACCTGGAGCCGTGGCACGCTGATATCATGGACTTTTTGGATTTGCGCA 438654 Query 94238 AGAACCACGGCAACGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGC 94294 |||| |||||| || ||| | | || | ||||| || || || |||||| | | Sbjct 438655 AGAATCACGGCGCGGA---GGACACTCGCGCACGTGACCTGTTTTATGCGCTCTGGATTC 438711 Query 94295 CAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATG 94354 | || ||||| ||||| || || || ||| || |||| | | || || ||| Sbjct 438712 CTGATCTTTTCATGAAGCGTGTGGAAGCCAACGGCGATTGGACGTTGATGTGCCCGGATG 438771 Query 94355 AATGTCCCGGACTGTCCGACGTTTGTGGA-TCGCGTTTTGAAGACTTGTATGCTCGTTAC 94413 |||| | || || | ||| || || ||| || | || || || ||||| | ||| Sbjct 438772 AATGCCGTGGTCTTTACGAGGTCTGGGGAGACGAG-TTCGAGGAGCTGTATACCAAGTAC 438830 Query 94414 GAATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTG 94473 || | |||| || | ||| ||| ||| | ||| ||| || | Sbjct 438831 GAGAAGGCCGGCATGGGTCGTAAGACTATCCCTGCCCAGTCGCTCTGGTTCGCCATACTC 438890 Query 94474 GACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAG 94533 | ||| | || || || || || | ||| | | ||| || || |||||| ||| Sbjct 438891 CAGAGCCAGATCGAAACAGGAACTCCGTTCATGCTCTACAAAGATGCTTGCAACGCGAAG 438950 Query 94534 TCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAG 94593 || ||||| || |||| ||| |||||| || ||||| ||| || || || || Sbjct 438951 TCGAACCAACAAAACCTTGGGACCATCAAGTCTTCAAATCTCTGCTGTGAAATCGTGCAG 439010 Query 94594 TATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCAT 94637 || || || ||||| || |||| ||||| || |||| ||||| Sbjct 439011 TACACGTCACCGGATGAAGTTGCGGTGTGCAATCTGGCTTCCAT 439054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720213108680