Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 196 6e-45 >seq5 Length=493739 Score = 196 bits (216), Expect = 6e-45 Identities = 843/1312 (64%), Gaps = 52/1312 (4%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | |||||||||||||| | || ||||| || | ||| || | ||| || Sbjct 439588 TAGATGTTACTTGTGTATGGCTCAAAAGATTCGTTGTTTCCAAGGATCTGTGATGTCGAC 439529 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| ||||| | || || ||||| | || ||||| | Sbjct 439528 GCAGTCGGCATAGGTGCGAGGAATAGCGAATTGCGCAATCCGTGTTTTGCCATGCGACGC 439469 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT------CCCACATATCAAAC 116076 || ||| ||||||| || | | || | ||| | |||| | || ||| Sbjct 439468 TTAAGGTCGTCCCAATCCCAC---AATTTATTATCCACAGTAGCGCCCCAAAGGTCGAAC 439412 Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136 ||||| | || || || ||||| || || | | |||||||||||||| || |||| Sbjct 439411 TGGAGCTTGCCCTGTGATGCTGGAGAGCCTTGGTACGTCTCATATGGGCCATCGCGCTCC 439352 Query 116137 GCCAATTCGGA--GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 116194 |||| || | | | | || || ||| || ||||| |||||||||||| || Sbjct 439351 GCCAG--CGAAATGGACTCATCCAGACAACCGTAGTAGATTGTTTCAAAAATGCGACGAT 439294 Query 116195 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCG 116253 ||| | |||||||| || || || || | | || ||| | || || || || Sbjct 439293 TCAACTCTTTGGCCTCCTCAGACTCGAATGGGT-ACCGCATGAGCATGAACGTGTCGGCC 439235 Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT--TTCGAGCGGTCT 116311 ||||| |||||||||| || || || || || | || ||| |||| ||| Sbjct 439234 AGACCCTGGACACCGACACCGATAGGTCGGTGGCGATGGTTGGACACCTTCGCC---TCT 439178 Query 116312 CC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTG 116370 || || || | ||||| || || | | || || || | |||| || | Sbjct 439177 GGTACCGGGTAGTAGTTCCTGTCAATGATTTTGTTGAGGTTGTACGTGATGACACGGGCT 439118 Query 116371 ATTTCATGAAGCTTTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAA 116428 | || | || |||| ||| ||| || | || || | || |||||| |||| | Sbjct 439117 ACCTCGTAGAG--TTTCTTAAAGTCATAAGTCTTCGTTTCCTTGTTCACATACATAGGCA 439060 Query 116429 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 116488 | || || || |||||||| ||||| | |||||| ||||||| | |||| Sbjct 439059 GCGCAATGGAAGCCAGATTGCACACCGCAACTTCATCCGGTGACGTGTACTGCACGATTT 439000 Query 116489 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 116548 | || | ||||||| ||| ||||| || | ||| | ||| || ||||| | ||| | Sbjct 438999 CACAGCAGAGATTTGAAGACTTGATGGTCCCAAGGTTTTGTTGGTTCGACTTCGCGTTGC 438940 Query 116549 ACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 116608 | ||||| ||||||||||| | || || || || || | ||| || ||| || || Sbjct 438939 AAGCATCTTTGTAGAGCATGAACGGAGTTCCTGTTTCGATCTGGCTCTGGAGTATGGCGA 438880 Query 116609 TCCATACATCGGCGGCTGGCACAGTGGCGTTGGCT--CGCCCCT------CCTCCTCGTA 116660 ||| | ||| |||| ||| | | | || || ||| ||| |||||| Sbjct 438879 ACCAGA-----GCGACTGGG-CAGGGA--TAGTCTTACGACCCATGCCGGCCTTCTCGTA 438828 Query 116661 CTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTT-A 116718 ||| || || || |||| ||||| || ||| ||| |||| | || || | || || | Sbjct 438827 CTTGGTATACAGCTCCTCGAACTCGTCTCCC-CAGACCTCGTAAAGACCACG-GCATTCA 438770 Query 116719 TCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 116778 || || || | | | ||| | || | || || ||||||||||| || || || Sbjct 438769 TCCGGGCACATCAACGTCCAATCGCCGTTGGCTTCCACACGCTTCATGAAAAGATCAGGA 438710 Query 116779 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 116838 ||||||||||| | || || || || ||||| || || | || ||||| ||| Sbjct 438709 ATCCAGAGCGCATAAAACAGGTCACGTGCGCGAGTGTCCTCCGCGCCGTGATTCTTGCGC 438650 Query 116839 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 116898 || |||||||||||||||||||| ||||||||||| |||||||| | || | || ||| Sbjct 438649 AAATCCAAAAAGTCCATGATATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGAGCCC 438590 Query 116899 TTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955 ||||| || ||| | |||| ||| || | ||| ||||| ||||| | || | ||| Sbjct 438589 TTGCGCTTACCGCCACCTTGGTCTACGTAGCGCGCGGTTGCATTAAAAATACGCAACATG 438530 Query 116956 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGA 117013 || | ||||| | | || ||||| || |||| || | | | | |||| |||| Sbjct 438529 GGCACAATACCGTTGCTCTTACCGTTTGTGCCGCGAATGTAGGCGCC--GCTGGCCCTGA 438472 Query 117014 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGA 117073 | |||| || || || || || || ||||| ||| || || | || | Sbjct 438471 TTTTGTGGCACGACAGGCCGATGCCACCAGCGCACTTGCTGATGAAGGCACATTGTGTCA 438412 Query 117074 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 117133 || || | || ||| | ||| ||| |||| | | | | |||||| || |||| Sbjct 438411 ACGTGTCGAATATTCCAGACAGCGAATCATCCTTCATGTCCAGCAAGAAGCAACTAGACA 438352 Query 117134 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 |||| |||||| | || |||| |||||| || || || ||||| |||| Sbjct 438351 TTTGGGGCCTTTGAGTTCCAGAAAAGAAGAGCGTGGGAGTTGCGTGTGTGAA 438300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503495950280