Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 104 6e-17 >seq1 Length=2541256 Score = 104 bits (114), Expect = 6e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||| |||| ||||||||| | | ||| | || || Sbjct 2427686 AGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 2427627 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| || ||||||||||||||||| ||| || || ||| Sbjct 2427626 TCGAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 2427567 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| ||||| ||||| | | || || || | |||||| ||| Sbjct 2427566 TGGATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGACCTCGAGCGTGATGGTC 2427507 Query 199598 TTACC 199602 || || Sbjct 2427506 TTGCC 2427502 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||| |||| ||||||||| | | || | || || Sbjct 1681903 AGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1681962 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||| || ||||||||||||||||| || || || ||| Sbjct 1681963 TCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 1682022 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || ||||| ||||| | | || || |||||||| || || Sbjct 1682023 TGGATCTTGGCCTTAACATTTTCGATAGTGTCACTGGGCTCAACTTCCAACGTAATGGTT 1682082 Query 199598 TTACC 199602 || || Sbjct 1682083 TTGCC 1682087 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||| |||| ||||||||| | | || | || || Sbjct 1682168 AGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1682227 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| ||||||||||||||||| || || || ||| Sbjct 1682228 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 1682287 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| ||||| ||||| | | || || || | |||||| ||| Sbjct 1682288 TGGATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGACCTCGAGCGTGATGGTC 1682347 Query 199598 TTACC 199602 || || Sbjct 1682348 TTGCC 1682352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178914304317361