Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 145 9e-30 >seq5 Length=493739 Score = 145 bits (160), Expect = 9e-30 Identities = 658/1029 (64%), Gaps = 23/1029 (2%) Strand=Plus/Minus Query 106202 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 106261 || || |||||||| || ||| ||||| ||| ||||| || || || || |||| ||| Sbjct 439318 TAGATTGTTTCAAAAATGCGACGATTCAACTCTTTGGCCTCCTCAGACTCGAATGGGTAC 439259 Query 106262 CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 106321 || | || || || || ||||| || ||||| | ||| ||||||| ||| || Sbjct 439258 CGCATGAGCATGAACGTGTCGGCCAGACCCTGGACACCGACACCGATAGGTCGGTGGCGA 439199 Query 106322 ATATTAGACT--TTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTA 106379 || ||| ||||| | | | |||| || | || |||||||||| | ||| | Sbjct 439198 TGGTTGGACACCTTCGC-CTCTGGTACCGGG-TAGTAGTTCCTGTCAATGATTTTGTTGA 439141 Query 106380 GATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCT 106439 | || | || | | | | || | ||||| | | | ||| |||| || | Sbjct 439140 GGTTGTACGTGATGACACGGGCTACCTCGTAGAGTTTCTTAAAGTCATAAGTCTTCGTTT 439081 Query 106440 CTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCT 106499 | | || |||||| | || || || || || |||| |||||| || || |||||| Sbjct 439080 CCTTGTTCACATACATAGGCAGCGCAATGGAAGCCAGATTGCACACCGCAACTTCATCCG 439021 Query 106500 TATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCT 106559 ||||||| | ||||| || | || ||| ||| || ||||| | || | Sbjct 439020 GTGACGTGTACTGCACGATTTCACAGCAGAGATTTGAAGACTTGATGGTCCCAAGGTTTT 438961 Query 106560 TTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCG 106619 |||||| ||| |||||| ||||| |||||||||||| | || || || || || Sbjct 438960 GTTGGTTCGACTTCGCGTTGCAAGCATCTTTGTAGAGCATGAACGGAGTTCCTGTTTCGA 438901 Query 106620 TCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTACA---ATGGCGTT--GGC 106674 |||| || ||| || || ||| | ||| |||| || || | || | | Sbjct 438900 TCTGGCTCTGGAGTATGGCGAACCAGA-----GCGACTGGG-CAGGGATAGTCTTACGAC 438847 Query 106675 CCGTCCCT-CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGG 106733 || | || || ||||||||| || || || | || ||||| || ||| | ||| Sbjct 438846 CCATGCCGGCCTTCTCGTACTTGGTATACAGCTCCTCGAACTCGTCTCCCCAGACCTCGT 438787 Query 106734 AGAGACCTGGTGCCTTG-TCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGC 106792 | ||||| | || || || || || | | | ||| | || | || || ||| Sbjct 438786 AAAGACCACG-GCATTCATCCGGGCACATCAACGTCCAATCGCCGTTGGCTTCCACACGC 438728 Query 106793 TTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCG 106852 ||||||||||| || |||||||| || | |||| || || | |||| || || Sbjct 438727 TTCATGAAAAGATCAGGAATCCAGAGCGCATAAAACAGGTCACGTGCGCGAGTGTCCTCC 438668 Query 106853 TCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGA 106912 | || || || || || || | || ||||||||||| |||||||| ||||| || Sbjct 438667 GCGCCGTGATTCTTGCGCAAATCCAAAAAGTCCATGATATCAGCGTGCCACGGCTCCAGG 438608 Query 106913 TAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCG 106969 || | || | ||| ||||| || || ||| |||| | ||| |||||||| || || Sbjct 438607 TAAATGGCAAAAGAGCCCTTGCGCTTACCGCCACCTTGGTCTACGTAGCGCGCGGTTGCA 438548 Query 106970 TTAAATACGCGAAGCATTGGAATAATACCATCTGAT-TGACCATTTGTCCCCCGAATACG 107028 ||||| | || | ||| || | |||||| | || | | ||| ||||| || ||||| Sbjct 438547 TTAAAAATACGCAACATGGGCACAATACCGT-TGCTCTTACCGTTTGTGCCGCGAATGTA 438489 Query 107029 AGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT 107088 | |||| || | | ||| || || || || ||||| ||||| ||| Sbjct 438488 GGCGCCGCTGGCCCTGATTTTGTGGCACGACAGGCCGATGCCACCAGCGCACTTGCTGAT 438429 Query 107089 TTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGAT 107148 ||||| | || | || | | || || | || || ||||| || | | Sbjct 438428 GAAGGCACATTGTGTCAACGTGTCGAATATTCCAGACAGCGAATCATCCTTCATGTCCAG 438369 Query 107149 AAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGC 107208 | ||||||||| ||||| || || ||| | || |||| | |||||| || || ||||| Sbjct 438368 CAAGAAGCAACTAGACATTTGGGGCCTTTGAGTTCCAGAAAAGAAGAGCGTGGGAGTTGC 438309 Query 107209 GTGAATGAA 107217 ||| |||| Sbjct 438308 GTGTGTGAA 438300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977237990920