Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5 141 2e-28 >seq5 Length=493739 Score = 141 bits (156), Expect = 2e-28 Identities = 658/1030 (64%), Gaps = 42/1030 (4%) Strand=Plus/Minus Query 213220 CGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGG 213279 |||||||||| |||||||| || | || | || |||||||| ||| ||| | Sbjct 439323 CGTAGTAGATTGTTTCAAAAATGCGACGATTCAACTCTTTGGCCTCCTCAGACTCGAATG 439264 Query 213280 GCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGT 213339 | | |||| | |||| || ||||| |||||||| |||| ||||| |||| || Sbjct 439263 GGTACCGCATGAGCATGAACGTGTCGGCCAGACCCTGGACACCGACACCGATAGGTCGGT 439204 Query 213340 GTCTCAGGTTAGAC---TTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCT 213396 | | |||| ||| || | ||| | ||||| |||| | ||| ||||| | Sbjct 439203 GGCGATGGTTGGACACCTTCGC---CTCTGGTACCGGGTAGTAGTTCCTGTCAATGATTT 439147 Query 213397 TGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT-GA-----TTGA 213450 ||||||||||| ||| ||||| |||| | ||||| || || | Sbjct 439146 TGTTGAGGTTGTACGTGA---------TGACACGGGCTAC---CTCGTAGAGTTTCTTAA 439099 Query 213451 ACACGTA-GCCCCCGT---CCTG--CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGC 213504 | | || | | ||| | || |||| || |||||| || ||| ||||| |||| Sbjct 439098 AGTCATAAGTCTTCGTTTCCTTGTTCACATACATAGGCAGCGCAATGGAAGCCAGATTGC 439039 Query 213505 AAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATC 213564 | || || || || | | ||||||| || ||| || ||| || || | Sbjct 439038 ACACCGCAACTTCATCCGGTGACGTGTACTGCACGATTTCACAGCAGAGATTTGAAGACT 438979 Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGT 213624 |||||| || ||||| || ||||| ||||| |||||| || ||| |||||||||||| Sbjct 438978 TGATGGTCCCAAGGTTTTGTTGGTTCGACTTCGCGTTGCAAGCATCTTTGTAGAGCATGA 438919 Query 213625 AGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGA 213684 | || | || || || | |||| | ||||| | |||||| || ||| || Sbjct 438918 ACGGAGTTCCTGTTTCGATCTGGCTCTGGAGTATGGCGAACCAGAGCGACTGGGCAGGGA 438859 Query 213685 CCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGT 213744 | | ||| | | ||| | |||||||| || ||||| | ||| |||| Sbjct 438858 TAGTCTTAC-GACCCATGCCGGCCTT--CTCGTACTTGGTATACAGCTCCTCGAACTCGT 438802 Query 213745 GGCCCCAGACCCTGTCCAGTCCCGGACAGG-ATGCGGGACACATGAGGCTCCAGTCCCCG 213803 ||||||||| || || || | || || |||| ||||| | |||| || ||| Sbjct 438801 CTCCCCAGACCTCGTAAAGACCACGGCATTCATCCGGG-CACATCAACGTCCAATCGCCG 438743 Query 213804 TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTG 213863 | || || | || |||||| || || || | ||| ||||| |||||||| | Sbjct 438742 TTGGCTTCCACACGCTTCATGAAAAGATCAGGAATCCAGAGCGCATAAAACAGGTCACGT 438683 Query 213864 GTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCG 213923 | | | || ||| | || || ||||||| ||| | |||||| | ||| || ||| Sbjct 438682 GCGCGAGTGTCCTCCGCGCCGTGATTCTTGCGCAAATCCAAAAAGTCCATGATATCAGCG 438623 Query 213924 TGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCAC- 213979 ||||||||||||| ||| |||||||| | |||| | ||| ||| || ||||| || Sbjct 438622 TGCCACGGCTCCAGGTAAATGGCAAAAGAGCCCTTGCGCTTACCGCCACCTTGGTCTACG 438563 Query 213980 CAGC-CTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGT 214038 ||| | | || || || || |||| | ||| || | |||||| || |||| Sbjct 438562 TAGCGCGCGGTTGCA--TTAAAAATACGCAACATGGGCACAATACCGTTGCTCTTACCGT 438505 Query 214039 TGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCAC 214098 | || || || || | |||| |||||| | ||| || || || ||||||| Sbjct 438504 TTGTGCCGCGAATGTAGGCGCCGCTGGCCCTGATTTTGTGGCACGACAGGCCGATGCCAC 438445 Query 214099 CGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGT 214158 | ||| ||||| ||| | ||| || | ||| || || | || || | || | Sbjct 438444 CAGCGCACTTGCTGATGAAGGCACATTGTGTCAACGTGTCGAATATTCCAGACAGCGAAT 438385 Query 214159 CATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGA 214218 |||| | | || |||||||||||| || || | |||||||| | ||||| || Sbjct 438384 CATCCTTCATGTCCAGCAAGAAGCAACTAGACATTTGGGGCCTTTGAGTTCCAGAAAAGA 438325 Query 214219 AAAGCGTGGG 214228 | |||||||| Sbjct 438324 AGAGCGTGGG 438315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527175870720