Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 1e-11 >seq5 Length=493739 Score = 84.2 bits (92), Expect = 1e-11 Identities = 225/337 (67%), Gaps = 8/337 (2%) Strand=Plus/Minus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| || | ||| |||||||| | |||||||| | || | || | | || || Sbjct 438728 CTTCATGAAAAGATCAGGAATCCAGAGCGCATAAAACAGGTCACGTGCGCGAGTGTCCTC 438669 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 ||||||||||| | ||| || || || | ||||| | |||||| || || | Sbjct 438668 CGCGCCGTGATTCTTGCGCAAATCCAAAAAGTCCATGATATCAGCGTGCCACGGCTCCAG 438609 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 || || |||||| || || | || || |||||||| |||||||| | || ||| | Sbjct 438608 GTAAATGGCAAAAGAGCCCTTGCGCTTACCGCCACCTTGGTCTACGTAGCGCGCGGTTGC 438549 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCT 26168 ||| |||| |||||| || || ||| | |||| | |||||||||| |||| | Sbjct 438548 ATTAAAAATACGCAACATGGGCAC-AATACCGTTGCTCTTACCGTTTGTGCCGCGAATGT 438490 Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGA-ATACCGATTCCACCAGCCCATTT--TG 26225 || || | | || || | ||| ||| || | ||||| |||||||| || || || Sbjct 438489 AGGCGCCGCTGGCCCTGATTTTGTG-GCACGACAGGCCGATGCCACCAGCGCACTTGCTG 438431 Query 26226 AAATAGCTGCACAATCTGAAACTGTATCGAAAATTCC 26262 | || ||||| | || | || ||||| ||||| Sbjct 438430 ATGAAG--GCACATTGTGTCAACGTGTCGAATATTCC 438396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038510464225