Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 262 5e-65 >seq1 Length=2541256 Score = 262 bits (290), Expect = 5e-65 Identities = 481/696 (69%), Gaps = 14/696 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCA--AAATGATC 195356 || |||||||||||||| || || || ||||| ||||| ||||| | | | | | | Sbjct 535469 GCGATTGGTATCGATTTGGGTACCACCTACTCCTGTGTGGGTGTCTACAAGGACAACAAC 535528 Query 195357 GTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTA 195416 ||| ||||| ||||| ||||||||||||||| | || || || ||||| || ||||| | Sbjct 535529 GTG--GAGATCATCCCTAATGACCAAGGAAACAGGACCACGCCCTCGTATGTCGCCTTCA 535586 Query 195417 CAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCA 195476 | || | || ||||| |||| || ||||| || || ||| || |||||| | Sbjct 535587 CCGACACCGAGCGTCTGATTGGTGACGCCGCCAAGAACCAGGAGGCCCGCAACCCTGAGA 535646 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | || ||||| ||||| ||| | || || || | | |||| || | || |||| Sbjct 535647 ACACCGTCTTCGACGCCAAGAGGCTCATCGGAAGGAGGTTTGACGACCCCACCGTTCAAG 535706 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCC-CGGTGTGGCTGATAAGCCTATGATT 195595 | || || ||| ||||| | | | ||| | || |||||| | | ||||| | ||| Sbjct 535707 ATGACATGAAGCACTGGCCCT-TCAAGGTCATCAACGGTGTTGGCGGCAAGCCCACCATT 535765 Query 195596 AATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTG 195655 | || || || || ||||||| || ||||||||||| ||||||||||| Sbjct 535766 GAAGTCACCTTCCAGGGACAGAAGAAGACCTTCCACCCCGAAGAAATCTCGTCTATGGTC 535825 Query 195656 TTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTT 195715 | || ||||||||||||| ||| || | | | || || | || || || || || Sbjct 535826 CTCATCAAGATGAAGGAGATTGCTGAGCTCTACCTCGGCAAGCCCGTCAAGGACGCCGTC 535885 Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775 | || || ||||| ||||||| || || || || ||||| || ||||| || | | | Sbjct 535886 ATCACCGTGCCTGCCTACTTCAACGACTCCCAGCGTCAGGCCACCAAGGATGCCGGTACC 535945 Query 195776 ATTGCGGGTCTAAACTGTC-TTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTA 195834 || || || || || |||| | | || ||||| || || || || || || ||||| || Sbjct 535946 ATCGCCGGACTCAA-TGTCATGCGTATCATCAACGAGCCCACCGCCGCCGCCATTGCGTA 536004 Query 195835 TGGTCTGGACAAGAACAAGGAC---GAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 ||||| |||||| |||| | || || || || || | ||||| ||||| || || Sbjct 536005 CGGTCTTGACAAG---AAGGGCTCTGAGGAGAAGAACGTGCTCATCTTCGATCTTGGAGG 536061 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| || ||||| || | || | || || | ||||| ||||| || ||||| || Sbjct 536062 TGGTACCTTCGATGTGTCCATCCTTACCATCGAGGACGGTATCTTCGAGGTCAAGGCCAC 536121 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| || || || |||||||| || ||||| Sbjct 536122 CGCCGGTGACACCCACCTTGGTGGTGAGGACTTCGA 536157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858428155760