Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq5 111 1e-19 >seq5 Length=493739 Score = 111 bits (122), Expect = 1e-19 Identities = 694/1088 (64%), Gaps = 47/1088 (4%) Strand=Plus/Minus Query 147259 CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTT 147318 |||| |||| || | ||||||| |||||||| |||||| ||||||||||| || Sbjct 439258 CGCATGAGCATGAACGTGTCGGCCAGACCCTGGACACCGACACCGATAGGTCGGTGGCGA 439199 Query 147319 TCGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAG 147377 | |||| |||||| ||| | || || |||| ||| | ||||| || |||||||| Sbjct 439198 TGGTTGGACACCTTCGC-CTCTGGTACCGGGTAGTAGTTCCTGTCAATGATTTTGTTGAG 439140 Query 147378 GTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCC-CGT--- 147433 ||| | | || | || | |||||||| || ||||||||| ||| Sbjct 439139 GTTGTACGTGATGACACGGGCTACCTCGTAGAGTTTCTTAAAGTCATAAGTCTTCGTTTC 439080 Query 147434 CTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTT 147493 ||| ||| ||| || || || || || || ||||||||||| || || || | Sbjct 439079 CTTGTTCACATAC--ATAGG--CAGCGCAATGGAAGCCAGATTGCACACCGCAACTTCAT 439024 Query 147494 C-GGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAA 147552 | || | || |||||||||||||||| ||| || || | || ||| |||||| Sbjct 439023 CCGGTGACG-TGTACTGCACGATTTCACAGCAGAGATTTGAAGACTTGATGG-TCCCAAG 438966 Query 147553 -TTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGT 147611 ||||| || || ||| ||||| || |||||| |||||||| |||| || || Sbjct 438965 GTTTTGTTGGTTCGACTTCGCGTTGCAAGCATCTTTGTAGAGCATGAACGGAGTTCCTGT 438906 Query 147612 CTCGACTTGCGTTTCAACGATAAACCTATGCAGGTC--CTGCGCTCGCACCCGCTGCCGA 147669 |||| || | | | || | | ||| | ||| || | | || ||| Sbjct 438905 TTCGATCTGGCTCTGGAGTATGG--CGAACCAGAGCGACTGGGCAGGGATAGTCTTACGA 438848 Query 147670 TAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCG 147729 ||| | || |||||| |||| | ||| |||||||| || || ||| Sbjct 438847 CCCATGCCGGCCTTCTCGTACTTGGTATACAGCTCCTCGAACTCGTCTCCCCAGACCTCG 438788 Query 147730 GCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGT 147789 ||| || | || | || ||| ||||||| || ||| | ||| || | || || Sbjct 438787 TAAAGACCACGGCATTCATCCGGGCACATCAACGTCCAATCGCCGTTGGCTTCCACACGC 438728 Query 147790 CGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAA---TCC 147846 ||| || ||||| || | ||| ||||| || | || || || || || | ||| Sbjct 438727 TTCATGAAAAGATCAGGAATCCAGAGCGCATAAAACAGGTCACGTGC---GCGAGTGTCC 438671 Query 147847 TCGGCGCCCA---TGTTGCGTTTCAAATTAAGCACG-CTATAGATGTCGGCGTGCCAGGG 147902 || ||||| | ||||| ||||| | | | | || ||| || |||||||| || Sbjct 438670 TCCGCGCCGTGATTCTTGCG---CAAATCCAAAAAGTCCAT-GATATCAGCGTGCCACGG 438615 Query 147903 TTCAATGTAGACGGCCAGCGCACCTTTACGCTTTCCGCCC---TGGTCGACATGGCGCAC 147959 || | ||| | ||| | | || || ||||| ||||| ||||| || | |||| | Sbjct 438614 CTCCAGGTAAATGGCAAAAGAGCCCTTGCGCTTACCGCCACCTTGGTCTACGTAGCGCGC 438555 Query 147960 CATGTTG--TTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAA 148017 |||| ||||| | |||| |||||| | | ||| | | ||||| ||| Sbjct 438554 G--GTTGCATTAAAAATACGCAACATGGGCACAATACCGTTGCTCTTACCGTTTGTGCCG 438497 Query 148018 TTGATCTTGCTGCCGCGGGCTCGCACTTCGTG-CACGTTAACGCCAATGCCGCCGCCGTA 148076 || | | ||||| ||| | | || ||| |||| | ||| ||||| || || | Sbjct 438496 CGAATGTAGGCGCCGCTGGCCCTGATTTTGTGGCACGACAG-GCCGATGCCACCAGCGCA 438438 Query 148077 CTT--TGAT-ATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTT 148133 ||| |||| | |||| || | ||| || | | || || | || | Sbjct 438437 CTTGCTGATGAAGGCA---CATTGTGTCAACGTGTCGAATATTCCAGACAGCGAATCATC 438381 Query 148134 TTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAG 148193 || | | | ||||| || || | ||||||| || | | ||||| | |||| || Sbjct 438380 CTTCATGTCCAGCAAGAAGCAACTAGACATTTGGGGCCTTTGAGTTCCAGAAAAGAAGAG 438321 Query 148194 GGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTC 148253 |||||| | ||||| || || |||| || ||||||| | ||||||||| || | | Sbjct 438320 CGTGGGAGTTGCGTGTGTGAAATATTTCTGGCTCATCAAGTGATACGTCTGGATGGTGCG 438261 Query 148254 TTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 ||||| ||| ||| ||| || ||| || || |||||||||||||||||||| ||||| Sbjct 438260 TTCGAGATCGCCGCAGTGTATACCCGCCGAAACACGCATGAGCATGTGCTGTGGACGTTC 438201 Query 148314 GGCAACTT 148321 ||| || Sbjct 438200 AACAATTT 438193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608322459880