Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 2e-15 >seq1 Length=2541256 Score = 96.9 bits (106), Expect = 2e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 34477 TCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCT 34536 ||||| || | || || | ||||| ||||| ||||||||||| || ||||| || || Sbjct 1681885 TCGCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 1681944 Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596 || || || || |||| || || || || ||||| || || | |||||| |||||||| Sbjct 1681945 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGG 1682004 Query 34597 GGCACTCCCTCCTTGTCTGTGATCTT 34622 || | ||||||||||| |||||| Sbjct 1682005 GGGATGCCCTCCTTGTCCTGGATCTT 1682030 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | ||||| ||||| ||||||||||| || ||||| || || || || || || Sbjct 1682162 AGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 1682221 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || || ||||| || | |||||| |||||||| || | |||||| Sbjct 1682222 CCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 1682281 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 1682282 TTGTCCTGGATCTT 1682295 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | ||||| ||||| ||||||||||| || ||||| || || || || || || Sbjct 2427692 AGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGG 2427633 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || || || || || | |||||| |||||||| || | |||||| Sbjct 2427632 CCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCC 2427573 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 2427572 TTGTCCTGGATCTT 2427559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727747324539