Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000723445.1_202014-06-26] 483 sequences; 13,840,936 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 >seq1 Length=2541256 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||||||||| || ||||||||||| ||||||||||| || Sbjct 1682149 CATACCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 1682208 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| |||| || |||||||| || |||||||||| ||||||||| || | Sbjct 1682209 GGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGG 1682268 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||| | || | || ||||| || || Sbjct 1682269 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTC 1682328 Query 44287 CACCTCCACCGTAATCGTCTTTCC 44310 ||||| | ||| || ||||| || Sbjct 1682329 GACCTCGAGCGTGATGGTCTTGCC 1682352 Score = 109 bits (120), Expect = 4e-19 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || ||||||||||| ||||||||||| |||| ||| ||| |||| || Sbjct 1681905 CACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTC 1681964 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| || |||| ||||||||| || | || | || ||||| ||| Sbjct 1681965 GAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 1682024 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || | || ||||| || || || |||| |||||| || || Sbjct 1682025 GATCTTGGCCTTAACATTTTCGATAGTGTCACTGGGCTCAACTTCCAACGTAATGGTTTT 1682084 Query 44308 TCC 44310 || Sbjct 1682085 GCC 1682087 Score = 105 bits (116), Expect = 5e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || ||||||||||| ||||||||||| |||| ||| ||| |||| || Sbjct 2427684 CACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTC 2427625 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || || |||| ||||||||| || | || | || ||||| ||| Sbjct 2427624 GAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 2427565 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || | || ||||| || || ||||| | ||| || ||||| Sbjct 2427564 GATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGACCTCGAGCGTGATGGTCTT 2427505 Query 44308 TCC 44310 || Sbjct 2427504 GCC 2427502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988280894011