Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 131 1e-25 >seq5 Length=493739 Score = 131 bits (144), Expect = 1e-25 Identities = 344/513 (67%), Gaps = 14/513 (3%) Strand=Plus/Minus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 || || || || |||||||| || || || || || |||||||||| || ||||| Sbjct 439057 GCAATGGAAGCCAGATTGCACACCGCAACTTCATCCGGTGACGTGTACTGCACGATTTCA 438998 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTT---TTCGA-TT 23136 || ||||| | |||| || || ||||| | | | |||| || |||| || Sbjct 438997 CAGCAGAGATTTGAAGACTTGATGGT-CCCAA---GGTTTTGTTGGTTCGACTTCGCGTT 438942 Query 23137 GCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGC 23196 ||| | ||| |||||||||||| |||| || || || |||| ||| || || || || Sbjct 438941 GCAAGCATCTTTGTAGAGCATGAACGGAGTTCCTGTTTCGATCTGGCTCTGGAGTATGGC 438882 Query 23197 TCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACC-TGCCTTCTTCCTCGTACTTTT 23255 ||| | | ||| || | | | ||| ||| || |||| | | ||||||||| Sbjct 438881 GAACCAGAGCGACTGGGCAGGGATA-GTCTTACGACCCATGCCGGCCTTCTCGTACTTGG 438823 Query 23256 GGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATC-GGA 23314 |||| | | || || ||| | || | ||| || || | ||| |||| || Sbjct 438822 TATACAGCTCCTCGAACTCGTCTCCCCAGACCTCGTAAAGACCACGGCATT-CATCCGGG 438764 Query 23315 CACATGAGACTCCACATTGA-GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCA 23373 ||||| | |||| || | || ||| || || |||| |||||||| || ||||| Sbjct 438763 CACATCAACGTCCA-ATCGCCGTTGGCTTCCACACGCTTCATGAAAAGATCAGGAATCCA 438705 Query 23374 TAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATC 23433 || || || ||||| || || ||||| ||||| |||| ||||| |||||| Sbjct 438704 GAGCGCATAAAACAGGTCACGTGCGCGAGTGTCCTCCGCGCCGTGATTCTTGCGCAAATC 438645 Query 23434 CAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCT 23493 ||||||||||| | || || ||||||||||| ||||||| |||||| | |||| | Sbjct 438644 CAAAAAGTCCATGATATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGAGCCCTTGCG 438585 Query 23494 CTTATTGCCGCCCTGATCGACGTAACGGGCCGT 23526 |||| ||| || || || ||||| || || || Sbjct 438584 CTTACCGCCACCTTGGTCTACGTAGCGCGCGGT 438552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763708685360