Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 152 8e-33 >seq3 Length=3518759 Score = 152 bits (168), Expect = 8e-33 Identities = 196/268 (73%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||||||||||| | |||| || ||||||||||| || ||||||||||| || | Sbjct 1603871 CGCCAAGCGTCATCGCA-AGGTCTTGCGTGATAACATCCAGGGTATCACCAAGCCTGCCA 1603813 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||| | || || ||||||||| |||| || || |||| || ||| Sbjct 1603812 TCCGTCGTCTTGCTCGTAGGGGAGGTGTCAAGCGTATCTCCGGTCTGATCTACGAGGAGG 1603753 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | |||| ||| | ||| ||||||| ||| ||| ||| || | || ||| |||| Sbjct 1603752 TCCGTGGTGTGCTCAAGGTCTTCCTTGAGAACGTCATCAGGGACTCCGTCACCTACACCG 1603693 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| | |||||||| || | ||||| || || || | | || | || | Sbjct 1603692 AGCACGCCCGCAGGAAGACTGTGACTGCTATGGACATTGTTTACTCCCTCAAGAGGCAGG 1603633 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| |||| ||||| || |||| Sbjct 1603632 GCCGTACCCTTTACGGTTTCGGTGGTTA 1603605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074758389719