Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 192 2e-43 >seq5 Length=493739 Score = 192 bits (212), Expect = 2e-43 Identities = 542/817 (66%), Gaps = 14/817 (2%) Strand=Plus/Plus Query 363414 ATCCTACCTATCT-CGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGC 363472 ||||||||| ||| || ||| | | | ||||||||||| || ||||| ||| | |||| Sbjct 438167 ATCCTACCT-TCTGCGCATCGACGACAAAATTGTTGAACGTCCACAGCACATGCTCATGC 438225 Query 363473 GTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTC 363532 ||||| | ||||| || ||| ||| | || | | || | || ||| | ||| Sbjct 438226 GTGTTTCGGCGGGTATACACTGCGGCGATCTCGAACGCACCATCCAGACGTATCA-CTTG 438284 Query 363533 TAAGTGCTCGTG-TATT-CACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAA 363590 | | || | |||| ||| ||||| || || || | | | | ||||||||| | Sbjct 438285 -ATGAGCCAGAAATATTTCACACACGCAACTCCCACGCTCTTCTTTTCTGGAACTCAAAG 438343 Query 363591 TCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTT 363650 || || |||||| |||||| | || | |||||||| ||||| | || || || Sbjct 438344 GCCCCAAATGTCTAGTTGCTTCTTGCTGGACATGAAGGATGATTCGCTGTCTGGAATATT 438403 Query 363651 TGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGAT 363710 ||||| | | | ||||| | || |||| || || || || || | ||| Sbjct 438404 CGACACGTTGACACAATGTGCCTTCATCAGCAAGTGCGCTGGTGGCATCGGCCTGTCGTG 438463 Query 363711 CCACAATGTTCGTGCACAGAACAGT-TACATTCGCGGCACAGGGGGATACTCGAATGGGC 363769 |||||| | | || ||| | ||||||||||||||| || | || || Sbjct 438464 CCACAAAATCAGGGC-CAGCGGCGCCTACATTCGCGGCACAAACGGTAAGAGCAACGGTA 438522 Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 | || |||||| | ||| | ||| | || ||| | ||||| ||||| ||||| || | Sbjct 438523 TTGTGCCCATGTTGCGTATTTTTAATGCAACCGCGCGCTACGTAGACCAAGGTGGCGGTA 438582 Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 ||||||| || | ||||| || || || ||||| || || ||||| | || ||| Sbjct 438583 AGCGCAAGGGCTCTTTTGCCATTTACCTGGAGCCGTGGCACGCTGATATCATGGACTTTT 438642 Query 363890 TTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCA 363948 | || | || || || ||| || ||||| || |||||||| ||||| ||||| Sbjct 438643 TGGATTTGCGCAAGAATCAC-GGCGCGGAGGACACTCGCGCACGTGACCTGTTTTATGCG 438701 Query 363949 CTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTT 364008 || ||| || |||| | ||| |||||||| ||||| || ||||| | | | Sbjct 438702 CTCTGGATTCCTGATCTTTTCATGAAGCGTGTGGAAGCCAACGGCGATTGGACGTTGATG 438761 Query 364009 TGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACT--ATGTTGCTCTAT 364066 ||||| | ||||| | ||||||| ||| || ||||| ||||| | | ||| ||| Sbjct 438762 TGCCCGGATGAATGCCGTGGTCTTTACGAGGTCTGGGGAGACGAGTTCGAGGAGCTGTAT 438821 Query 364067 ACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGT 364126 || ||||| || || || | || ||||||||| || || || ||| ||| |||| Sbjct 438822 AC--CAAGTACGAGAAGGCCGGCATGGGTCGTAAGACTATCCCTGCCCAGTCGCTCTGGT 438879 Query 364127 TTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGT 364186 | ||||| | | ||||| || |||||||| || | ||| | ||||||||| | | Sbjct 438880 TCGCCATACTCCAGAGCCAGATCGAAACAGGAACTCCGTTCATGCTCTACAAAGATGCTT 438939 Query 364187 GCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223 ||||| ||||| ||||| || ||||||| || || Sbjct 438940 GCAACGCGAAGTCGAACCAACAAAACCTTGGGACCAT 438976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345534277706