Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 >seq1 Length=2541256 Score = 102 bits (112), Expect = 8e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| || ||||| | || | ||| |||||| || |||||||| ||| Sbjct 1681887 GCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 1681946 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| ||| | || | ||||||||||||||| || Sbjct 1681947 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGGGG 1682006 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||| | | || | ||| || ||| ||| | Sbjct 1682007 GATGCCCTCCTTGTCCTGGATCTTGGCCTTAACATTTTCGATAGTGTCACTGGGCTCAAC 1682066 Query 131187 GTCGACGGTAACGGTTTTACC 131207 || | |||| |||||| || Sbjct 1682067 TTCCAACGTAATGGTTTTGCC 1682087 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||| |||||| || |||||||| ||| Sbjct 1682153 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1682212 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| || |||| | ||||||||||||||| ||| Sbjct 1682213 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 1682272 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | ||| || ||| ||||| Sbjct 1682273 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGACC 1682332 Query 131188 TCGACGGTAACGGTTTTACC 131207 |||| || | ||| || || Sbjct 1682333 TCGAGCGTGATGGTCTTGCC 1682352 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| |||| || ||||| | || | ||| |||||| || |||||||| Sbjct 2427707 ATGATGCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAG 2427648 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 ||| | ||||| |||||| ||||||||||| ||| | || | ||||||||||||| Sbjct 2427647 TCGGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCC 2427588 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || || || || || ||||| ||| || ||| | | || | ||| || ||| | Sbjct 2427587 GGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGC 2427528 Query 131182 TCGATGTCGACGGTAACGGTTTTACC 131207 |||| |||| || | ||| || || Sbjct 2427527 TCGACCTCGAGCGTGATGGTCTTGCC 2427502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009950222720