Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 3e-13 seq3 84.2 4e-11 >seq1 Length=2541256 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 142055 CTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCC 142114 || |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| || Sbjct 972728 CTTTGTGGCGCAATGGATAGCGCGTCGGACTTCTAATCCGAAGGTTGCGGGTTCGAGTCC 972669 Query 142115 CGCCAGAG 142122 |||| ||| Sbjct 972668 CGCCGGAG 972661 >seq3 Length=3518759 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGG-TAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| ||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||| Sbjct 1009094 GCCCTCTTAGCTCAGTCGGATAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 1009153 Query 142563 CCCCACATCGGGC 142575 ||| || |||| Sbjct 1009154 TCCCTCAGGGGGC 1009166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027830439296203