Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 178 2e-39 >seq5 Length=493739 Score = 178 bits (196), Expect = 2e-39 Identities = 838/1312 (64%), Gaps = 52/1312 (4%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| || | |||||||||||||| | || ||||| || | ||| || | || || Sbjct 439588 TAGATGTTACTTGTGTATGGCTCAAAAGATTCGTTGTTTCCAAGGATCTGTGATGTCGAC 439529 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTT 114059 || || ||||| ||||| | || || || || | || | ||| || ||||| Sbjct 439528 GCAGTCGGCATAGGTGCGAGGAATAGCGAATTGCGCAATCCGTGTTTTGCC--ATGCGAC 439471 Query 114060 CCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT----GCCACATA--TCAA 114113 ||| ||| ||||||| || | | || | ||| | ||| || | || | Sbjct 439470 GCTTAAGGTCGTCCCAATCCCAC---AATTTATTATCCACAGTAGCGCCCCAAAGGTCGA 439414 Query 114114 ACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCT 114173 ||||||| | || || || ||||| || || | | ||||| |||||||| || || Sbjct 439413 ACTGGAGCTTGCCCTGTGATGCTGGAGAGCCTTGGTACGTCTCATATGGGCCATCGCGCT 439354 Query 114174 CCGCCAATTCGGA--GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGC 114231 |||||| || | | | | || || ||| || ||||| |||||||||||| Sbjct 439353 CCGCCAG--CGAAATGGACTCATCCAGACAACCGTAGTAGATTGTTTCAAAAATGCGACG 439296 Query 114232 ATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGC 114291 ||||| | |||||||| || || || || | | || | || || || || Sbjct 439295 ATTCAACTCTTTGGCCTCCTCAGACTCGAATGGGTACCGCATGAGCATGAACGTGTCGGC 439236 Query 114292 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT--TTCGAGCGGTC 114349 ||||| |||||||||| || || || || || | || ||| |||| || Sbjct 439235 CAGACCCTGGACACCGACACCGATAGGTCGGTGGCGATGGTTGGACACCTTCGCC---TC 439179 Query 114350 TCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGT 114408 | || || || | ||||| || || | | || || || | |||| || | Sbjct 439178 TGGTACCGGGTAGTAGTTCCTGTCAATGATTTTGTTGAGGTTGTACGTGATGACACGGGC 439119 Query 114409 GATTTCATGAAGCTTTTCGTAA--TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGA 114466 | || | || |||| ||| ||| || | || || | || |||||| |||| Sbjct 439118 TACCTCGTAGAG--TTTCTTAAAGTCATAAGTCTTCGTTTCCTTGTTCACATACATAGGC 439061 Query 114467 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 114526 || || || || |||||||| ||||| | |||||| ||||||| | ||| Sbjct 439060 AGCGCAATGGAAGCCAGATTGCACACCGCAACTTCATCCGGTGACGTGTACTGCACGATT 439001 Query 114527 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 114586 || || | ||||||| ||| ||||| || | ||| | ||| || ||||| | ||| Sbjct 439000 TCACAGCAGAGATTTGAAGACTTGATGGTCCCAAGGTTTTGTTGGTTCGACTTCGCGTTG 438941 Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 114646 || ||||| ||||| |||||| | || || || || || | ||| || ||| || || Sbjct 438940 CAAGCATCTTTGTAGAGCATGAACGGAGTTCCTGTTTCGATCTGGCTCTGGAGTATGGCG 438881 Query 114647 TTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCT--CGCCCCT------CCTCCTCGT 114698 ||||| ||| |||| ||| | | | || || ||| ||| ||||| Sbjct 438880 AACCAGA-----GCGACTGGG-CAGGGA--TAGTCTTACGACCCATGCCGGCCTTCTCGT 438829 Query 114699 ACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-A 114757 |||| || || || | || ||||| || ||| | |||| | || || | || || | Sbjct 438828 ACTTGGTATACAGCTCCTCGAACTCGTCTCCCCAGACCTCGTAAAGACCACG-GCATTCA 438770 Query 114758 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGG 114817 || ||||| | | | ||| | || | || |||||||||||||| || || || Sbjct 438769 TCCGGGCACATCAACGTCCAATCGCCGTTGGCTTCCACACGCTTCATGAAAAGATCAGGA 438710 Query 114818 ATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 114877 |||||||| || | || || || || ||||| || || | || ||||| ||| Sbjct 438709 ATCCAGAGCGCATAAAACAGGTCACGTGCGCGAGTGTCCTCCGCGCCGTGATTCTTGCGC 438650 Query 114878 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 114937 || |||||||||||||||||||| ||||||||||| |||||||| | || | || ||| Sbjct 438649 AAATCCAAAAAGTCCATGATATCAGCGTGCCACGGCTCCAGGTAAATGGCAAAAGAGCCC 438590 Query 114938 TTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATT 114994 || || || ||| | |||| ||| || | ||| || |||||||| | || | ||| Sbjct 438589 TTGCGCTTACCGCCACCTTGGTCTACGTAGCGCGCGGTTGCATTAAAAATACGCAACATG 438530 Query 114995 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGA 115052 || | ||||| | | || ||||| || |||| || | | | |||| |||| Sbjct 438529 GGCACAATACCGTTGCTCTTACCGTTTGTGCCGCGAATGTAGGCGCC--GCTGGCCCTGA 438472 Query 115053 CATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 115112 | ||| || || || || || || ||||| ||| || || | || | Sbjct 438471 TTTTGTGGCACGACAGGCCGATGCCACCAGCGCACTTGCTGATGAAGGCACATTGTGTCA 438412 Query 115113 GACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACA 115172 || || | || || | ||| ||| |||| | | | | |||||| || |||| Sbjct 438411 ACGTGTCGAATATTCCAGACAGCGAATCATCCTTCATGTCCAGCAAGAAGCAACTAGACA 438352 Query 115173 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 |||| |||||| | || |||| |||||| || || || ||||| |||| Sbjct 438351 TTTGGGGCCTTTGAGTTCCAGAAAAGAAGAGCGTGGGAGTTGCGTGTGTGAA 438300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349993477640