Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq5 113 4e-20 >seq5 Length=493739 Score = 113 bits (124), Expect = 4e-20 Identities = 693/1082 (64%), Gaps = 51/1082 (5%) Strand=Plus/Minus Query 153396 CGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTC 153455 |||| |||| || | ||||||||||||||||| |||||| ||||| ||||| || Sbjct 439258 CGCATGAGCATGAACGTGTCGGCCAGACCCTGGACACCGACACCGATAGGTCGGTGGCGA 439199 Query 153456 TCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAG 153514 | |||| | |||| ||| | || || |||| || | || || ||||||||||| Sbjct 439198 TGGTTGGACACCTTCGC-CTCTGGTACCGGGTAGTAGTTCCTGTCAATGATTTTGTTGAG 439140 Query 153515 GTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTC 153574 |||| | | || | || | | | ||||||| || ||||| ||| ||||| Sbjct 439139 GTTGTACGTGATGACACGGGCTACCTCGTAGAGTTTCTTAAAGTCATAAGTC--TTCGTT 439082 Query 153575 GACGCGTACGCATCGATT--CACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTC- 153631 | || | ||| || || ||||| || |||||||| || || || || || Sbjct 439081 TCCTTGTTCACATACATAGGCAGCGCAATGGAAGCCAGATTGCACACCGCAACTTCATCC 439022 Query 153632 GGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATT 153691 || | || ||||||||||||| || |||||| || | || ||| || | || Sbjct 439021 GGTGACG-TGTACTGCACGATTTCACAGCAGAGATTTGAAGACTTGATGGTCCCAAGGTT 438963 Query 153692 TTGCTGATT-GCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCT 153750 ||| || || | || ||| ||||| || |||||| |||||||| |||| || || | Sbjct 438962 TTGTTGGTTCGACTTCGCG-TTGCAAGCATCTTTGTAGAGCATGAACGGAGTTCCTGTTT 438904 Query 153751 CGACTTGCGTTTCGACGATAAACCTATGCAGGTC--CTGCGCTCGCACCCGCTGCCGATA 153808 ||| || | | || || | | ||| | ||| || | | || ||| Sbjct 438903 CGATCTGGCTCTGGAGTATGG--CGAACCAGAGCGACTGGGCAGGGATAGTCTTACGACC 438846 Query 153809 GCGGCCCTCGCTCTCGTA-TCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGG 153867 ||| | ||||||| | | | ||||| ||| |||||||| || || ||| Sbjct 438845 CATGCCGGCCTTCTCGTACTTGGTA-TACAGCTCCTCGAACTCGTCTCCCCAGACCTCGT 438787 Query 153868 CGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTC 153927 || || | || | || ||| ||||||| || ||| ||| ||| | || || Sbjct 438786 AAAGACCACGGCATTCATCCGGGCACATCAACGTCCAATCGCCGTTGGCTTCCACACGCT 438727 Query 153928 GCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAA---TCCT 153984 |||||| ||||| || | ||||||||| || | ||||| || || || | |||| Sbjct 438726 TCATGAAAAGATCAGGAATCCAGAGCGCATAAAACAGGTCACGTGC---GCGAGTGTCCT 438670 Query 153985 CCGCGCCCA---TGTTGCGTTTCAGATTGAGCACG-CTATAGATGTCGGCGTGCCAGGGT 154040 ||||||| | ||||| || || | | | | || ||| || |||||||| || Sbjct 438669 CCGCGCCGTGATTCTTGCG---CAAATCCAAAAAGTCCAT-GATATCAGCGTGCCACGGC 438614 Query 154041 TCAATGTAGACGGCCAGGGCACCTTTACGCTTTCCGCCC---TGATCGACGTGGCGCACC 154097 || | ||| | ||| | | || || ||||| ||||| || || |||| |||| | Sbjct 438613 TCCAGGTAAATGGCAAAAGAGCCCTTGCGCTTACCGCCACCTTGGTCTACGTAGCGCGCG 438554 Query 154098 ATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTG-CCGTTGGT----CG 154152 | || || | |||| |||||| | | ||| |||| | ||||| || || Sbjct 438553 GTTGCATTAAAAATACGCAACATGGGCACAATACCG-TTGCTCTTACCGTTTGTGCCGCG 438495 Query 154153 AATTGATCTTGCTGCCGCGGGCGCGCACTTGATG-CACGTTAACGCCAATGCCGCCGCCG 154211 ||| | || ||||| ||| | | || || |||| | ||| ||||| || || Sbjct 438494 AATGTAG---GC-GCCGCTGGCCCTGATTTTGTGGCACGACAG-GCCGATGCCACCAGCG 438440 Query 154212 TACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCG 154268 |||| |||| | |||| || | || ||| | | || || | ||| Sbjct 438439 CACTTGCTGATGAAGGCA---CATTGTGTCAACGTGTCGAATATTCCAGACAGCGAATCA 438383 Query 154269 TCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAG 154328 || | | | |||||||| || | ||||||| || | | ||||| | | ||| Sbjct 438382 TCCTTCATGTCCAGCAAGAAGCAACTAGACATTTGGGGCCTTTGAGTTCCAGAAAAGAAG 438323 Query 154329 AGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCG 154388 || |||||| | ||||| || || ||| |||||||||| | | ||||| | ||||| | Sbjct 438322 AGCGTGGGAGTTGCGTGTGTGAAATATTTCTGGCTCATCAAGTGATACGTCTGGATGGTG 438263 Query 154389 TCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGT 154448 ||||| ||| ||| ||| || || || || ||||||||||||||||| |||||| Sbjct 438262 CGTTCGAGATCGCCGCAGTGTATACCCGCCGAAACACGCATGAGCATGTGCTGTGGACGT 438203 Query 154449 TC 154450 || Sbjct 438202 TC 438201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259403815760