Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 2e-13 >seq5 Length=493739 Score = 91.5 bits (100), Expect = 2e-13 Identities = 330/506 (65%), Gaps = 18/506 (4%) Strand=Plus/Minus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATG 203896 || |||| || ||||||| |||||| | || || ||| | | ||| ||||| | Sbjct 439977 TCGTGTCAACAGTGAACTTAATGGCATCAGTAGCCGGT-TGCGTGCGCAGGTAGTAAACA 439919 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGTT 203955 || || || | || |||| ||||||||| | ||||||| | || || | | ||| Sbjct 439918 CCAGTTTTCAATCCTTTCTTCCACCCGTAGAAGTGCATGCTGGTGAGCTTACCGAACGTC 439859 Query 203956 GG--GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCT 204013 || | ||| |||| ||||| || || || |||||||||||| | || || Sbjct 439858 GGCTGCTCG---ATGTATATGTTAAGCGATTGCGACTGGTCGATGAAAATACCGCGGTCC 439802 Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073 || ||||| | ||||||| |||| ||| |||||||| || |||||| | | |||| || Sbjct 439801 GCCGCCATGTCGATAATGTTCTTTTGCTTGATCTCCCAAACTGTCTTGTATAGGTCTTTG 439742 Query 204074 GTGTGTTGAGGCACATCTTCCCACGT-CCTGATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132 ||||||| || | | | | | | || || | || || || | ||| |||| | || Sbjct 439741 ATGTGTTGCGGTATACCCT-CGATGTGTCTAAGAGAACCATTATAGGCGATCAATTTCTG 439683 Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATC----AGCTCCCGCACCAGGTGGGGGT 204188 || | | || |||| | ||| || |||| | || |||| || ||||||| Sbjct 439682 TTTCATGTTTTCGTCCCA-AAGCC---CCAGATCCACTAAATCGCGCAGGAGATGGGGGT 439627 Query 204189 TGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTT 204248 | | || || || || ||||||| || | | | ||| | ||| |||| | Sbjct 439626 TAACGACGAAGAACTCGCCACTGAGCACCCGGCGATAGTAGATGTTACTTGTGTATGGCT 439567 Query 204249 CGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGA 204308 | || | |||||||| || | ||||| | || || || ||||| || || |||| Sbjct 439566 CAAAAGATTCGTTGTTTCCAAGGATCTGTGATGTCGACGCAGTCGGCATAGGTGCGAGGA 439507 Query 204309 GCAGGGAGTTGCGCACACCGTATTTT 204334 || || ||||||| |||| |||| Sbjct 439506 ATAGCGAATTGCGCAATCCGTGTTTT 439481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150399250480