Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 136 4e-27 >seq1 Length=2541256 Score = 136 bits (150), Expect = 4e-27 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||||| ||||| ||||||||||| || ||||| |||| || Sbjct 1681905 CACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTC 1681964 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| |||| ||||||||||| | || | || |||||||||| Sbjct 1681965 GAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 1682024 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | | | | ||||| || | || || |||| ||| |||||||| Sbjct 1682025 GATCTTGGCCTTAACATTTTCGATAGTGTCACTGGGCTCAACTTCCAACGTAATGGTTTT 1682084 Query 46564 GCC 46566 ||| Sbjct 1682085 GCC 1682087 Score = 132 bits (146), Expect = 5e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||||| ||||| ||||||||||| |||||||| |||| || Sbjct 2427684 CACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTC 2427625 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| ||||| |||| ||||||||||| | || | || |||||||||| Sbjct 2427624 GAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 2427565 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | | | | ||||| || | || || || | ||||||||| || Sbjct 2427564 GATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGACCTCGAGCGTGATGGTCTT 2427505 Query 46564 GCC 46566 ||| Sbjct 2427504 GCC 2427502 Score = 123 bits (136), Expect = 3e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||||| ||||| ||||||||||| || ||||| |||| || Sbjct 1682170 CACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTC 1682229 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||| || || |||| ||||||||||| | || | || |||||||||| Sbjct 1682230 GAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 1682289 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | | | | ||||| || | || || || | ||||||||| || Sbjct 1682290 GATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGACCTCGAGCGTGATGGTCTT 1682349 Query 46564 GCC 46566 ||| Sbjct 1682350 GCC 1682352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234987373160