Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 251 9e-62 >seq1 Length=2541256 Score = 251 bits (278), Expect = 9e-62 Identities = 988/1533 (64%), Gaps = 38/1533 (2%) Strand=Plus/Minus Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 ||||| || || || || || | | ||||| || || | || ||| || |||| | Sbjct 536982 CCCTTGTCGTTGGTGATGGTGACGTGCTCGGACTTTCCGGTGGACTTGTCCATAGCAGTG 536923 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 || || | ||||| || || |||| ||||| | || | || || || |||||| Sbjct 536922 ACGTTGAGGATACCGTTGGCGTCAATGTCGAAAGTGACCTCGATCTGGGGCACACCCCTG 536863 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 || |||| | ||| || || | | || | || || | |||| ||| | | | | Sbjct 536862 GGGGCGGGGGCAATTCCGGTAAGGTGGAACTTTCCGAGGAGGTTGTTGTCCTTGGTCATG 536803 Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCA----GGTTGATTATCTTGTGCCGT 6870 ||| ||||| || |||| | || ||| | ||||| || || | || || Sbjct 536802 GCACGCTCACCCTCGAAGACCTGGATGAACACACCTTCCTGGTTG-TTCTCGT-TG--GT 536747 Query 6871 TGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCAT 6930 | |||||| || ||||| | || || || || || ||| || | | ||||| Sbjct 536746 GGTGAAGATCTGGGTCTTCTTGGTGGGGATGGTAGTGTTCCTCTTGATGAGCACAGTCAT 536687 Query 6931 AATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC 6990 | |||||| || ||||| || || |||||||| | || || | | ||||| || Sbjct 536686 GACACCACCAGCGGTCTCGAGACCGAGGGACAGAGGGGCGACATCGAGCAACAACAGCTC 536627 Query 6991 TTGAACAGATTCGTTCC---CT--TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || | || | || || ||||| | | ||||||||| ||||| | || ||| Sbjct 536626 CTGGA-----TCTTGCCAGACTGGTCACCAGACAGGATGGCGGCCTGGACGGCGGCACCG 536572 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || ||||| |||||||||||||| || | | | || || ||||| || | ||| Sbjct 536571 TAGGCGACGGCCTCATCGGGGTTGATGGAGCGGCTGGGCTCCTTTCCGTTGAAGAAGTCC 536512 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | | || || || || ||||| || || || |||||||| | |||| || | Sbjct 536511 TTGATGAGCTGCTGGATCTTGGGGATACGGGTGGAACCACCGACGAGCACGACCTCGTGG 536452 Query 7166 ACTTTCGATTTATCGAT--CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223 | ||| || || | | || | ||| ||| | || ||||| || | Sbjct 536451 ATCTTCCTCTTGTCAAGGCCACTG-GACTCCAAG-GCCTTCTCGACGGGGATGAGGGTGC 536394 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 | |||| || ||||| ||||| ||||| |||||| | |||| || | | | | Sbjct 536393 CCCTGAACTTCTCACCACACATCTCCTCGAAACGAGCACGGCTGATGGTGGTGTTGTAGT 536334 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 | | || ||||| | || || | |||||||| | || | | || | | | Sbjct 536333 CGATACCCTCGTAGAGGGAGTCGAGCTCAATGGTGGCCTGGGTGGAGCTGGACAGCACAC 536274 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 |||| ||||||||||| || | | |||||| ||||||||| ||| | || | | Sbjct 536273 GCTTGGCGCGCTCACAGTGGGTCCTGAGACGACGGAGGGCACGCTTGTTGCTGGCGAGGT 536214 Query 7404 -CTTTCTTATGTTTACGTTTA--AACTCTTCAGAGA-AGTG-TCGA--AGGAGTCTCGAA 7456 ||| | |||| | | | || || | || | |||| |||| || || | Sbjct 536213 TCTTGCCGTTGTTGATCCTCATGAAGTCA-CGGACACAGTGCTCGACGAGCAGGTTG--- 536158 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | ||| || || || ||||| || ||||| || |||||||| Sbjct 536157 TCGAAGTCCTCACCACCAAGGTGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCG 536098 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | || ||||| || |||||||| || || || || ||||| ||| Sbjct 536097 TCCTCGATGGTAAGGATGGACACATCGAAGGTACCACCTCCAAGATCGAAGATGAGCACG 536038 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | || || ||||| || ||||||||||| || || || || || || || Sbjct 536037 TTCTTCTCCTCAGAGCCCTTCTTGTCAAGACCGTACGCAATGGCGGCGGCGGTGGGCTCG 535978 Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| | |||| || || || || || || | ||||| || || || || || Sbjct 535977 TTGATGATACGCATGACA-TTGAGTCCGGCGATGGTACCGGCATCCTTGGTGGCCTGACG 535919 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || ||||| |||||||| || || || | ||| |||||| |||| ||| ||||| Sbjct 535918 CTGGGAGTCGTTGAAGTAGGCAGGCACGGTGATGACGGCGTCCTTGACGGGCTTGCCGAG 535859 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || || || || || ||||| ||| | || ||||| || || || ||||| | Sbjct 535858 GTAGAGCTCAGCAATCTCCTTCATCTTGATGAGGACCATAGACGAGATTTCTTCGGGGTG 535799 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 || ||| | | || | || |||||||| |||| || | || ||||| Sbjct 535798 GAAGGTCTTCTTCTGTCCCTGGAAGGTGACTTCAATGGTGGGCTTGCCGCCAACACCGTT 535739 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| ||||| | | ||| | ||||| || ||||| || |||| |||| | || Sbjct 535738 GATGACCTTGAAGGGCCAGTGCTTCATGTCATCTTGAACGGTGGGGTCGTCAAACCTCCT 535679 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 |||||| || | ||| || || || || ||||| | ||||| ||| |||||||| Sbjct 535678 TCCGATGAGCCTCTTGGCGTCGAAGACGGTGTTCTCAGGGTTGCGGGCCTCCTGGTTCTT 535619 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || ||||| || || ||||| || | || || || ||||| ||||| || || || Sbjct 535618 GGCGGCGTCACCAATCAGACGCTC---GGTGTCGGTGAAGGCGACATACGAGGGCGTGGT 535562 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 | || |||||||| || | || || || ||| || || | |||| || || || Sbjct 535561 CCTGTTTCCTTGGTCATTAGGGATGATCTCCACGTTGTTGTCCTTGTAGACACCCACACA 535502 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || ||||| ||||| || || Sbjct 535501 GGAGTAGGTGGTACCCAAATCGATACCAATCGC 535469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128965385720