Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 154 2e-32 seq3 82.4 9e-11 >seq5 Length=493739 Score = 154 bits (170), Expect = 2e-32 Identities = 518/796 (65%), Gaps = 13/796 (2%) Strand=Plus/Minus Query 110254 GTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAA 110313 || ||||| ||||| || ||||| | || || ||||| || || ||||||||||| | | Sbjct 439090 GTCTTCGTTTCCTTGTTCACATACATAGGCAGCGCAATGGAAGCCAGATTGCACACCGCA 439031 Query 110314 GTCTCGTCTT-TGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGAC 110372 || || || || |||| | || ||||| || | || ||| ||| ||| Sbjct 439030 ACTTCATCCGGTGACG-TGTACTGCACGATTTCACAGCAGAGATTTGAAGACTTGATGGT 438972 Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432 || | ||| | || ||||| || | |||||| ||||| || ||||||||| | || || Sbjct 438971 CCCAAGGTTTTGTTGGTTCGACTTCGCGTTGCAAGCATCTTTGTAGAGCATGAACGGAGT 438912 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT-- 110489 || ||||| |||| || ||| ||||| ||| | | | | ||| |||| ||| Sbjct 438911 TCCTGTTTCGATCTGGCTCTGGAGTATGGCGAACCAGAGCGACTG-GGCAGGGATAGTCT 438853 Query 110490 TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTA 110549 | || | | | || ||| |||||||||||| |||| ||||| || || | ||| | Sbjct 438852 TACG--ACCCATGCCGGCCTTCTCGTACTTGGTATACAGCTCCTCGAACTCGTCTCCCCA 438795 Query 110550 CACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCACCCTCCT 110608 || || ||||||| || || || || || | | | ||||| || | | Sbjct 438794 GACCTCGTAAAGACCACG-GCATTCATCCGGGCACATCAACGTCCAATCGCCGTTGGCTT 438736 Query 110609 CAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAG 110668 | || | ||||||||| || ||||||||||| | ||| | || |||||||| |||| Sbjct 438735 CCACACGCTTCATGAAAAGATCAGGAATCCAGAGCGCATAAAACAGGTCACGTGCGCGAG 438676 Query 110669 CCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATG 110728 || || | || || || ||| | |||||||||||||||||||| | |||||| | Sbjct 438675 TGTCCTCCGCGCCGTGATTCTTGCGCAAATCCAAAAAGTCCATGATATCAGCGTGCCACG 438616 Query 110729 GTTCGAGATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTG 110785 | || || || | || | || ||||| || || || | |||| || ||||| | Sbjct 438615 GCTCCAGGTAAATGGCAAAAGAGCCCTTGCGCTTACCGCCACCTTGGTCTACGTAGCGCG 438556 Query 110786 CTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCC 110845 | || ||||| || | | | ||| || | ||| || | | | ||| ||||| || | Sbjct 438555 CGGTTGCATTAAAAATACGCAACATGGGCACAATACCGTTGCTCTTACCGTTTGTGCCGC 438496 Query 110846 TAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACT 110905 ||| || |||| | || | |||| || || || ||||| || |||| Sbjct 438495 GAATGTAGGCGCCGCTGGCCCTGATTTTGTGGCACGACAGGCCGATGCCACCAGCGCACT 438436 Query 110906 TACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGT 110965 | || || ||||| | ||| | || | | || ||| | |||||| |||| Sbjct 438435 TGCTGATGAAGGCACATTGTGTCAACGTGTCGAATATTCCAGACAGCGAATCATCCTTCA 438376 Query 110966 TGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAG 111025 || | | | |||||| |||||| || || | | ||||| | | |||||| || | Sbjct 438375 TGTCCAGCAAGAAGCAACTAGACATTTGGGGCCTTTGAGTTCCAGAAAAGAAGAGCGTGG 438316 Query 111026 GTGTCGCATGAATGAA 111041 | || || || |||| Sbjct 438315 GAGTTGCGTGTGTGAA 438300 >seq3 Length=3518759 Score = 82.4 bits (90), Expect = 9e-11 Identities = 259/397 (65%), Gaps = 12/397 (3%) Strand=Plus/Plus Query 167318 TGATATCGTCAGGGTTAAATGGGGGGATGTAGCAACTGAAACCCGTACCAATACCTTCAG 167377 |||| |||| ||||| | |||||| | || |||||||| || || || || || Sbjct 2472183 TGATGTCGTACGGGTTGTAGTTGGGGATCTGGCTGCTGAAACCGGTGCCTATGCCCTCGC 2472242 Query 167378 TACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAAAGTCGGGTTCAATGGAACGAC 167437 | ||||| |||| ||||| || | ||| || ||||| || || || ||| | | Sbjct 2472243 TGCCGTTGACCAGCACCATGGGGATAGTGGGGATGTAGTAGAACGGCTCGATGATCTGGC 2472302 Query 167438 CATCATCATCCAAGTAGTTGAGAATGGCATCATCTTTGGGATCGAAGAGCTTTCGAGCCT 167497 | || || | ||| | || | | || || | |||||| | ||||| Sbjct 2472303 CCTCCTCGTTTTGGTACTGCAGCACGTTGTCGTCCTCCTCCACGAAGATC-----AGCCT 2472357 Query 167498 CCT--TGG---TAAGCTTCGTAAAGATGTACCTCGTCTGAGACGCATCCTTGCCACCCAT 167552 | | ||| | ||||| || |||||||| | || | ||| || |||||||| ||| Sbjct 2472358 CGTGATGGGCATCAGCTTGGTGAAGATGTAACGCGCCGCAGAGGCGTCCTTGCCGCCCTC 2472417 Query 167553 GAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTTATTCGACCCCGTATA 167612 ||| | || ||||| ||||| ||||| || | || ||||| || ||||| | Sbjct 2472418 CTTGCGGCTGCCGAATTGGCCACACGGCTCCAGCACGTTTATGTTGTTGGACCCAACGAA 2472477 Query 167613 ATCGTTGGCCAACTTGACGATCGTTT-CAGCGAGGGAAACTTCGCCGTGGTGGTAAGCAC 167671 ||| | |||| |||| ||| || | | || || || |||||||||||||||| || Sbjct 2472478 ATCCTGCGCCATGTTGATGATGGTCTGCTGC-AGCGACGCTTCGCCGTGGTGGTACGCGG 2472536 Query 167672 TCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTT 167708 | || |||||||| | | || ||| || ||||| Sbjct 2472537 AGTGCTCGGCCACATAGCCCGTCAGCTGCGCCACCTT 2472573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972444057400