Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 6e-11 >seq2 Length=2823968 Score = 82.4 bits (90), Expect = 6e-11 Identities = 153/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 29809 TCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGG-TTC 29867 |||||||| | | ||| | ||| || ||| ||||| |||| || || || ||| | ||| Sbjct 182931 TCCACGTGGTTTACGTAAATGTGCGCATCTGCCAGGTTGTGCACGAATTCGCCCAGCTTC 182872 Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927 |||| | || ||||| | |||| ||| | | ||||| |||||||| || || Sbjct 182871 AAGCC-GCACACCTGAGCAACCATGGCCGTCAATATCGAGTACGACGCGATGTTGAACGG 182813 Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 29987 || || | || | ||| | || | ||||| | | ||| || |||| || |||| Sbjct 182812 CACGCCCAATCCGAGGTCACAAGAACGCTGGTGCATCATACAAGATAGCTTCCCATCGCG 182753 Query 29988 CACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCAT 30029 |||||||||||| ||| | |||||| ||||| | ||||| Sbjct 182752 CACGTAAAACTGGAACAGGCAGTGGCATGGAGGCAACGCCAT 182711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615194646959