Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=2541256 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || |||||||| || || || ||||| || || ||| | || Sbjct 2427692 AGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGG 2427633 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || || || ||||| ||||| || |||| ||||| ||||||| Sbjct 2427632 CCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCC 2427573 Query 48669 TTGTC 48673 ||||| Sbjct 2427572 TTGTC 2427568 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 48537 TCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCA 48596 ||||| || | || || | ||||| || || |||||||| || || || ||||| || Sbjct 1681885 TCGCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 1681944 Query 48597 GATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656 || || | || |||| || | |||||| ||||| || ||||| ||||| || |||| | Sbjct 1681945 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGG 1682004 Query 48657 GGAACGCCCTCCTTGTC 48673 || | |||||||||||| Sbjct 1682005 GGGATGCCCTCCTTGTC 1682021 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || |||||||| || || || ||||| || || || | || Sbjct 1682162 AGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 1682221 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || ||||| ||||| ||||| || |||| ||| | ||||||| Sbjct 1682222 CCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 1682281 Query 48669 TTGTC 48673 ||||| Sbjct 1682282 TTGTC 1682286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935357587009