Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 147 3e-30 >seq5 Length=493739 Score = 147 bits (162), Expect = 3e-30 Identities = 826/1304 (63%), Gaps = 34/1304 (3%) Strand=Plus/Plus Query 75305 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGT 75364 |||| |||||||| || || |||||| | |||| || | ||| || || ||||| ||| Sbjct 438300 TTCACACACGCAACTCCCACGCTCTTCTTTTCTGGAACTCAAAGGCCCCAAATGTCTAGT 438359 Query 75365 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 75424 |||||| | | | || ||||| || || | || || | | || | || | Sbjct 438360 TGCTTCTTGCTGGACATGAAGGATGATTCGCTGTCTGGAATATTCGACACGTTGACACAA 438419 Query 75425 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 75484 ||||| ||| ||||| ||||| || || || || ||| | | || ||| Sbjct 438420 TGTGCCTTCATCAGCAAGTGCGCTGGTGGCATCGGCCTGTCGTGCCACAAAATCAGGGCC 438479 Query 75485 AATAAATCTCGTATTCGGGGGACAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCG 75543 | | ||||| || ||||| ||| | | || | |||||| | || ||| | || Sbjct 438480 AGCGGCGCCTACATTCGCGGCACAAACGGTAAGAGCA-ACGGTATTGTGCCCATGTTGCG 438538 Query 75544 CGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCAT 75600 | ||||| || || |||||||| ||| | |||| || || |||||||| || | Sbjct 438539 TATTTTTAATGCAACCGCGCGCTACGTAGACCAAGGTGGCGGTAAGCGCAAGGGCTCTTT 438598 Query 75601 CGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAA 75660 || | ||| |||| || ||||| || ||||||||||| || | || || || || Sbjct 438599 TGCCATTTACCTGGAGCCGTGGCACGCTGATATCATGGACTTTTTGGATTTGCGCAAGAA 438658 Query 75661 CCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCT 75720 || || | || || |||| | || || |||| | || |||||||| || || Sbjct 438659 TCACGGCGCGGAGGACACTCGCGCACGTGACCTGTTTTATGCGCTCTGGATTCCTGATCT 438718 Query 75721 TTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGA-CAAGGCAC 75779 |||||||||||| || || | || | ||| | | | || || || || || | Sbjct 438719 TTTCATGAAGCGTGTGGAAGCCAACGGCGATTGGACGTTGATGTGCCCGGATGAATGC-C 438777 Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839 ||||| | ||| | ||| || ||||| || | || || || ||||| || ||| Sbjct 438778 GTGGTCTTTACGAGGTCTGGGGAGACGAGTTCGAGGAGCTGTATACCAAGTACGAGAAGG 438837 Query 75840 AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCA 75898 || | | | |||| | || ||| | | | | ||| || || ||| | Sbjct 438838 CCGGCATGGGTCGTAAGACTATCCCTGCC-CAGTCGCTCTGGTTCGCCATACTCCAGAGC 438896 Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 |||| || || ||||| || | ||||| ||||| |||||||| ||| |||| ||| Sbjct 438897 CAGATCGAAACAGGAACTCCGTTCATGCTCTACAAAGATGCTTGCAACGCGAAGTCGAAC 438956 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018 ||| | || | || || |||||| |||||||| ||| ||||| | ||||||| Sbjct 438957 CAACAAAACCTTGGGACCATCAAGTCTTCAAATCTCTGCTGTGAAATCGTGCAGTACACG 439016 Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAAT 76078 |||||| || || |||||| |||| || || || || || | |||||| || Sbjct 439017 TCACCGGATGAAGTTGCGGTGTGCAATCTGGCTTCCATTGCGCTGCCTATGTATGTGAAC 439076 Query 76079 GAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAA 76138 | || || |||| ||| | | | ||||| | || | | | | || | Sbjct 439077 AAGGAAACGAAGACTTATGACTTTAAGAAACTCTACGAGGTAGCCCGTGTCATCACGTAC 439136 Query 76139 AATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAA--AGTCTA 76196 || || ||| | |||||||||| || | || |||| | | | ||||| ||| | Sbjct 439137 AACCTCAACAAAATCATTGACAGGAACTACTA-CCCGGTACCAGAG-GCGAAGGTGTCCA 439194 Query 76197 ATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGT 76256 | || ||| ||||||| ||| | ||||| || ||||| || || || || | Sbjct 439195 ACCATCGCCACCGACCTATCGGTGTCGGTGTCCAGGGTCTGGCCGACACGTTCATGCTCA 439254 Query 76257 GCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCA 76316 || ||| |||| || || || || ||||| ||| ||||| ||| || |||||||| | Sbjct 439255 TGCGGTACCCATTCGAGTCTGAGGAGGCCAAAGAGTTGAATCGTCGCATTTTTGAAACAA 439314 Query 76317 TGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCT---GAAGC-CCAAGGTTCCTAT 76372 | || ||| | ||||| |||| | || ||| | ||| | | || | ||| Sbjct 439315 TCTACTACGGTTGTCTGGA--TGAGT--CCATTTCGCTGGCGGAGCGCGATGGCCCATAT 439370 Query 76373 GAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGT 76432 ||||| | | || ||||| || || || || ||| ||||| || | |||| | | Sbjct 439371 GAGACGTACCAAGGCTCTCCAGCATCACAGGGCAAGCTCCAGTTCGACCTTTGGGGCGCT 439430 Query 76433 ------GAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGA 76484 || | || | | || ||||| | || ||| ||||| ||| | Sbjct 439431 ACTGTGGATAATAAATT---GTGGGATTGGGACGACCTTAAGCGTCGCATGGCAA--AAC 439485 Query 76485 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 76544 | || | || || || || | ||||| ||||| || || || || |||| ||| Sbjct 439486 ACGGATTGCGCAATTCGCTATTCCTCGCACCTATGCCGACTGCGTCGACATCACAGATCC 439545 Query 76545 TGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 | || || || |||| ||||| |||||||||| ||||||||| Sbjct 439546 TTGGAAACAACGAATCTTTTGAGCCATACACAAGTAACATCTAC 439589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565998211040