Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 >seq1 Length=2541256 Score = 102 bits (112), Expect = 8e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| ||| ||||| || ||||| ||| | ||| |||||||||||||||||| Sbjct 1681917 GGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 1681976 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| || |||||||| |||||||| |||||| ||| Sbjct 1681977 GGCGAAAATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 1682036 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 | | || | ||||| ||||||| || || | || | ||||||||| Sbjct 1682037 AACATTTTCGATAGTGTCACTGGGCTCAACTTCCAACGTAATGGTTTTGCC 1682087 Score = 102 bits (112), Expect = 8e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| ||| ||||| || ||||| ||| | ||| |||||||||||||||||| Sbjct 2427672 GGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCC 2427613 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 2427612 AGCGAAAATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 2427553 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 | | || | ||||| ||||||| || |||| |||| ||| ||||| Sbjct 2427552 AACGTTTTCGATAGTGTCACTGGGCTCGACCTCGAGCGTGATGGTCTTGCC 2427502 Score = 96.9 bits (106), Expect = 3e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| ||| ||||| || ||||| ||| | ||| |||||||||||||||||| Sbjct 1682182 GGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 1682241 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || |||||||| |||||||| |||||| ||| Sbjct 1682242 AGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 1682301 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 | | || | ||||| ||||||| || |||| |||| ||| ||||| Sbjct 1682302 AACGTTTTCGATAGTGTCACTGGGCTCGACCTCGAGCGTGATGGTCTTGCC 1682352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417881346920