Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 seq3 93.3 4e-14 >seq2 Length=2823968 Score = 96.9 bits (106), Expect = 3e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| ||||||||||||||||| |||||| ||||||||||||| ||||| |||| | | Sbjct 330517 GCGGGCATGGTCTAGTGGTTATGACGTCTGCCTTACACGCAGAAGATCCCGAGTTCGAGC 330458 Query 39838 CCCGGTGCCCGTATTT 39853 | |||||||||||||| Sbjct 330457 CTCGGTGCCCGTATTT 330442 >seq3 Length=3518759 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| ||||| |||| ||| Sbjct 363173 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGAGTTCGATC 363114 Query 39838 CCCGGTGCCCGTATTT 39853 | |||||||||||||| Sbjct 363113 CTCGGTGCCCGTATTT 363098 Score = 82.4 bits (90), Expect = 7e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| ||||||||||| |||| || ||| || |||||||| || ||||| |||| ||| Sbjct 363413 GCGGGCGTGGTCTAGTGGCTATGACGCCTGCTTCACACGCAGGAGATCCCGAGTTCGATC 363354 Query 39838 CCCGGTGCCCGTATTTCT 39855 | ||| |||||||||||| Sbjct 363353 CTCGGCGCCCGTATTTCT 363336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466121985771520