Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 >seq1 Length=2541256 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | || |||||||| || |||||||| |||| Sbjct 1681888 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1681947 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| || || || |||| ||||||||||||| || Sbjct 1681948 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCCGGGGGG 1682007 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||| | | || | | ||||| || | || || Sbjct 1682008 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACATTTTCGATAGTGTCACTGGGCTCAACT 1682067 Query 35690 TCCACCGTGATCGTTTTACC 35709 |||| ||| || ||||| || Sbjct 1682068 TCCAACGTAATGGTTTTGCC 1682087 Score = 109 bits (120), Expect = 5e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | || |||||||| || |||||||| |||| Sbjct 1682153 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1682212 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| || ||||| |||| ||||||||||||| || Sbjct 1682213 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 1682272 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||| | || | | ||||| || | || ||| Sbjct 1682273 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGACC 1682332 Query 35690 TCCACCGTGATCGTTTTACC 35709 || | |||||| || || || Sbjct 1682333 TCGAGCGTGATGGTCTTGCC 1682352 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | || |||||||| || |||||||| |||| Sbjct 2427701 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 2427642 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| || || || |||| ||||||||||||| ||| Sbjct 2427641 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCCGGGGGA 2427582 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| |||||| ||| | || | | ||||| || | || ||| Sbjct 2427581 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACGTTTTCGATAGTGTCACTGGGCTCGACC 2427522 Query 35690 TCCACCGTGATCGTTTTACC 35709 || | |||||| || || || Sbjct 2427521 TCGAGCGTGATGGTCTTGCC 2427502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790878333640