Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20bigemina_20[genbank_20GCA_5F000981445.1_202014-06-13] 483 sequences; 13,840,936 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq332 839 0.0 seq285 428 2e-115 seq268 396 1e-105 seq27 280 5e-71 seq295 194 6e-45 seq37 194 6e-45 seq36 194 6e-45 seq298 150 7e-32 >seq332 Length=2615 Score = 839 bits (930), Expect = 0.0 Identities = 467/468 (99%), Gaps = 0/468 (0%) Strand=Plus/Plus Query 22431 GTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGT 22490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGT 60 Query 22491 TTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTC 22550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTC 120 Query 22551 TTTCATTGCCATACGGAATTCCGGATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAA 22610 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTTCATTGCCATACGAAATTCCGGATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAA 180 Query 22611 GGCCGGATAAAACTTGTGCTTATTTTTCTTTACGGTCTTTAAAAAGGCCGTAATATCCAG 22670 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGCCGGATAAAACTTGTGCTTATTTTTCTTTACGGTCTTTAAAAAGGCCGTAATATCCAG 240 Query 22671 CTGAACGGTCTGGTTATAGGTACATTGAGCAACTGACTGAAATGCCTCAAAATGTTCTTT 22730 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CTGAACGGTCTGGTTATAGGTACATTGAGCAACTGACTGAAATGCCTCAAAATGTTCTTT 300 Query 22731 ACGATGCCATTGGGATATATCAACGGTGGTATATCCAGTGAtttttttCTCCATTTTAGC 22790 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ACGATGCCATTGGGATATATCAACGGTGGTATATCCAGTGATTTTTTTCTCCATTTTAGC 360 Query 22791 TTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGATCTTATTTC 22850 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGATCTTATTTC 420 Query 22851 ATTATGGTGAAAGTTGGAACCTCTTACGTGCCGATCAACGTCTCATTT 22898 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 ATTATGGTGAAAGTTGGAACCTCTTACGTGCCGATCAACGTCTCATTT 468 >seq285 Length=7332 Score = 428 bits (474), Expect = 2e-115 Identities = 237/237 (100%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 22113 GCCTTaaaaaaaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 22172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7096 GCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 7155 Query 22173 CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 22232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7156 CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 7215 Query 22233 CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTT 22292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7216 CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTT 7275 Query 22293 GTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA 22349 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7276 GTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA 7332 >seq268 Length=3205 Score = 396 bits (438), Expect = 1e-105 Identities = 223/224 (99%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 22113 GCCTTaaaaaaaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 22172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2979 GCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 3038 Query 22173 CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 22232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3039 CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 3098 Query 22233 CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTT 22292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3099 CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTT 3158 Query 22293 GTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCC 22336 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 3159 GTCCATATTGGCCACG-TTAAATCAAAACTGGTGAAACTCACCC 3201 >seq27 Length=2189 Score = 280 bits (310), Expect = 5e-71 Identities = 159/160 (99%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 22113 GCCTTaaaaaaaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 22172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 159 GCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 100 Query 22173 CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 22232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 99 CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 40 Query 22233 CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTG 22272 ||||||||||||||||||||||| |||||||||||||||| Sbjct 39 CAGCACCTTGTCGCCTTGCGTAT-ATATTTGCCCATGGTG 1 >seq295 Length=1947 Score = 194 bits (214), Expect = 6e-45 Identities = 107/107 (100%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 22782 CATTTTAGCTTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGA 22841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 201 CATTTTAGCTTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGA 142 Query 22842 TCTTATTTCATTATGGTGAAAGTTGGAACCTCTTACGTGCCGATCAA 22888 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 TCTTATTTCATTATGGTGAAAGTTGGAACCTCTTACGTGCCGATCAA 95 >seq37 Length=2201 Score = 194 bits (214), Expect = 6e-45 Identities = 107/107 (100%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 22782 CATTTTAGCTTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGA 22841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 202 CATTTTAGCTTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGA 143 Query 22842 TCTTATTTCATTATGGTGAAAGTTGGAACCTCTTACGTGCCGATCAA 22888 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 142 TCTTATTTCATTATGGTGAAAGTTGGAACCTCTTACGTGCCGATCAA 96 >seq36 Length=1854 Score = 194 bits (214), Expect = 6e-45 Identities = 107/107 (100%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 22782 CATTTTAGCTTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGA 22841 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1043 CATTTTAGCTTCCTTAGCTCCTGAAAATCTCGATAACTCAAAAAATACGCCCGGTAGTGA 984 Query 22842 TCTTATTTCATTATGGTGAAAGTTGGAACCTCTTACGTGCCGATCAA 22888 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 983 TCTTATTTCATTATGGTGAAAGTTGGAACCTCTTACGTGCCGATCAA 937 >seq298 Length=17434 Score = 150 bits (166), Expect = 7e-32 Identities = 87/88 (99%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 22113 GCCTTaaaaaaaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 22172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 100 GCCTTAAAAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG 41 Query 22173 CATTCTGCCGACATGGAAGCCATCACAA 22200 |||||||||||||| ||||||||||||| Sbjct 40 CATTCTGCCGACAT-GAAGCCATCACAA 14 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184443742093794